STRINGSTRING
AOF98170.1 AOF98170.1 AOF97094.1 AOF97094.1 pyrD pyrD AOF98417.1 AOF98417.1 AOF95862.1 AOF95862.1 AOF97444.1 AOF97444.1 AOF95587.1 AOF95587.1 AOF98435.1 AOF98435.1 dapB dapB AOF96512.1 AOF96512.1 AOF95470.1 AOF95470.1 AOF97522.1 AOF97522.1 AOF96095.1 AOF96095.1 BSY17_553 BSY17_553 BSY17_557 BSY17_557 BSY17_566 BSY17_566 BSY17_567 BSY17_567 BSY17_569 BSY17_569 BSY17_576 BSY17_576 cobA-2 cobA-2 BSY17_691 BSY17_691 sdhA sdhA sdhD sdhD sdhC sdhC BSY17_723 BSY17_723 hemN hemN BSY17_811 BSY17_811
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
AOF98170.1[E] COG0287 Prephenate dehydrogenase. (301 aa)
AOF97094.1Conserved hypothetical protein; [S] COG1981 Predicted membrane protein. (146 aa)
pyrDDihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (350 aa)
AOF98417.1Short chain dehydrogenase family protein; [I] COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH). (268 aa)
AOF95862.1Hypothetical protein; cysG_Nterm: siroheme synthase, N-terminal domain protein; [H] COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain). (252 aa)
AOF97444.1Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases. (379 aa)
AOF95587.1Radical SAM methylthiotransferase, MiaB/RimO family protein; [J] COG0621 2-methylthioadenine synthetase. (436 aa)
AOF98435.1dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur family protein; [C] COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit. (262 aa)
dapB4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (254 aa)
AOF96512.1NDP-sugDHase: nucleotide sugar dehydrogenase family protein; [M] COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (431 aa)
AOF95470.1Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases. (380 aa)
AOF97522.1[R] COG3871 Uncharacterized stress protein (general stress protein 26). (156 aa)
AOF96095.1TIM-barrel, nifR3 family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (340 aa)
BSY17_553Hypothetical protein; acyl-CoA dehydrogenase, C-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases. (360 aa)
BSY17_557Hypothetical protein; acyl-CoA dehydrogenase, C-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases. (402 aa)
BSY17_566Zinc-binding dehydrogenase family protein; [R] COG2130 Putative NADP-dependent oxidoreductases. (338 aa)
BSY17_567Zinc-binding dehydrogenase family protein; [R] COG2130 Putative NADP-dependent oxidoreductases. (330 aa)
BSY17_569Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases. (387 aa)
BSY17_576Zinc-binding dehydrogenase family protein; [R] COG2130 Putative NADP-dependent oxidoreductases. (343 aa)
cobA-2cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase; [H] COG0007 Uroporphyrinogen-III methylase. (265 aa)
BSY17_691Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases. (600 aa)
sdhAsdhA_forward: succinate dehydrogenase, flavoprotein subunit; [C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (600 aa)
sdhDSucc_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein; [C] COG2142 Succinate dehydrogenase, hydrophobic anchor subunit. (129 aa)
sdhCsucc_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit; [C] COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit. (110 aa)
BSY17_723Radical SAM superfamily protein; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (415 aa)
hemNhemN: oxygen-independent coproporphyrinogen III oxidase; [H] COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (435 aa)
BSY17_811[H] COG0408 Coproporphyrinogen III oxidase. (295 aa)
Your Current Organism:
Sphingobium sp. RAC03
NCBI taxonomy Id: 1843368
Other names: S. sp. RAC03
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