(42 nodes) CheY-like superfamily network (Sphingobium sp. RAC03)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BSY17_980	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (240 aa)
	AOF95568.1	[T] COG3707 Response regulator with putative antiterminator output domain. (193 aa)
	AOF98240.1	Response regulator; [T] COG0784 FOG: CheY-like receiver. (118 aa)
	AOF96674.1	Sensory box protein; [T] COG0642 Signal transduction histidine kinase. (807 aa)
	AOF96695.1	[NT] COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain. (140 aa)
	AOF97388.1	Response regulator; [T] COG0784 FOG: CheY-like receiver. (116 aa)
	BSY17_137	Response regulator; [T] COG0784 FOG: CheY-like receiver. (151 aa)
	AOF98470.1	Sensory box protein; [T] COG0642 Signal transduction histidine kinase. (749 aa)
	AOF97335.1	Bacterial regulatory s, luxR family protein; [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. (258 aa)
	AOF98496.1	GAF domain protein; [T] COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase). (853 aa)
	AOF96954.1	Response regulator; [T] COG0784 FOG: CheY-like receiver. (144 aa)
	AOF97043.1	Bacterial regulatory s, luxR family protein; [T] COG4566 Response regulator. (207 aa)
	AOF95910.1	[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (207 aa)
	phoB	phoB: phosphate regulon transcriptional regulatory protein PhoB; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (233 aa)
	AOF96584.1	Response regulator; [T] COG0784 FOG: CheY-like receiver. (121 aa)
	AOF97423.1	cheB methylesterase family protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (360 aa)
	AOF97362.1	[KT] COG3279 Response regulator of the LytR/AlgR family. (267 aa)
	AOF97329.1	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (242 aa)
	AOF95480.1	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (236 aa)
	AOF96288.1	[T] COG0642 Signal transduction histidine kinase. (663 aa)
	AOF95499.1	Bacterial regulatory, Fis family protein; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. (481 aa)
	AOF97979.1	Response regulator; [U] COG4963 Flp pilus assembly protein, ATPase CpaE. (430 aa)
	AOF97651.1	Response regulator; [T] COG0642 Signal transduction histidine kinase. (1119 aa)
	AOF95647.1	Bacterial regulatory s, luxR family protein; [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. (189 aa)
	AOF97153.1	Response regulator; [T] COG0784 FOG: CheY-like receiver. (263 aa)
	prsR	[T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. (454 aa)
	AOF96079.1	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (235 aa)
	AOF98268.1	Sensory box protein; [T] COG0642 Signal transduction histidine kinase. (671 aa)
	AOF97616.1	Sensory box protein; [T] COG2202 FOG: PAS/PAC domain. (654 aa)
	AOF96413.1	Bacterial regulatory, Fis family protein; [TK] COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain. (177 aa)
	AOF97432.1	Bacterial regulatory, Fis family protein; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. (456 aa)
	ntrC	Nitrogen regulation protein NR; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (481 aa)
	BSY17_387	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (221 aa)
	BSY17_437	[KT] COG3279 Response regulator of the LytR/AlgR family. (247 aa)
	BSY17_478	[T] COG0642 Signal transduction histidine kinase. (1119 aa)
	BSY17_479	Bacterial regulatory s, luxR family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (307 aa)
	BSY17_481	Response regulator; [T] COG0784 FOG: CheY-like receiver. (145 aa)
	BSY17_527	GGDEF: diguanylate cyclase domain protein; [T] COG2200 FOG: EAL domain. (684 aa)
	BSY17_755	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (235 aa)
	BSY17_802	Response regulator; [T] COG0784 FOG: CheY-like receiver. (125 aa)
	BSY17_867	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (239 aa)
	BSY17_912	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (238 aa)

Your Current Organism:

Sphingobium sp. RAC03

NCBI taxonomy Id: 1843368
Other names: S. sp. RAC03

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOF95480.1	AOF96584.1	BSY17_2234	BSY17_2134	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	Response regulator; [T] COG0784 FOG: CheY-like receiver.	0.664
AOF95480.1	AOF97616.1	BSY17_2234	BSY17_2859	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	Sensory box protein; [T] COG2202 FOG: PAS/PAC domain.	0.863
AOF95480.1	AOF97651.1	BSY17_2234	BSY17_2555	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	Response regulator; [T] COG0642 Signal transduction histidine kinase.	0.687
AOF95480.1	AOF98268.1	BSY17_2234	BSY17_2815	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	0.618
AOF95480.1	AOF98470.1	BSY17_2234	BSY17_1614	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	0.895
AOF95480.1	BSY17_478	BSY17_2234	BSY17_478	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	[T] COG0642 Signal transduction histidine kinase.	0.477
AOF95499.1	AOF96288.1	BSY17_2384	BSY17_2312	Bacterial regulatory, Fis family protein; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.	[T] COG0642 Signal transduction histidine kinase.	0.584
AOF95499.1	AOF96674.1	BSY17_2384	BSY17_1120	Bacterial regulatory, Fis family protein; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	0.473
AOF95499.1	AOF97616.1	BSY17_2384	BSY17_2859	Bacterial regulatory, Fis family protein; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.	Sensory box protein; [T] COG2202 FOG: PAS/PAC domain.	0.524
AOF95499.1	AOF97651.1	BSY17_2384	BSY17_2555	Bacterial regulatory, Fis family protein; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.	Response regulator; [T] COG0642 Signal transduction histidine kinase.	0.589
AOF95499.1	AOF98470.1	BSY17_2384	BSY17_1614	Bacterial regulatory, Fis family protein; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	0.452
AOF95499.1	BSY17_802	BSY17_2384	BSY17_802	Bacterial regulatory, Fis family protein; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.	Response regulator; [T] COG0784 FOG: CheY-like receiver.	0.425
AOF95647.1	AOF96288.1	BSY17_2556	BSY17_2312	Bacterial regulatory s, luxR family protein; [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.	[T] COG0642 Signal transduction histidine kinase.	0.644
AOF95647.1	AOF96674.1	BSY17_2556	BSY17_1120	Bacterial regulatory s, luxR family protein; [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	0.415
AOF95647.1	AOF96695.1	BSY17_2556	BSY17_1242	Bacterial regulatory s, luxR family protein; [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.	[NT] COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.	0.441
AOF95647.1	AOF97616.1	BSY17_2556	BSY17_2859	Bacterial regulatory s, luxR family protein; [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.	Sensory box protein; [T] COG2202 FOG: PAS/PAC domain.	0.705
AOF95647.1	AOF97651.1	BSY17_2556	BSY17_2555	Bacterial regulatory s, luxR family protein; [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.	Response regulator; [T] COG0642 Signal transduction histidine kinase.	0.925
AOF95647.1	AOF98268.1	BSY17_2556	BSY17_2815	Bacterial regulatory s, luxR family protein; [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	0.520
AOF95647.1	AOF98470.1	BSY17_2556	BSY17_1614	Bacterial regulatory s, luxR family protein; [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	0.867
AOF95647.1	BSY17_478	BSY17_2556	BSY17_478	Bacterial regulatory s, luxR family protein; [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.	[T] COG0642 Signal transduction histidine kinase.	0.547