(10 nodes) EAL domain superfamily network (Sphingobium sp. RAC03)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BSY17_892	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. (569 aa)
	AOF98172.1	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. (856 aa)
	AOF96557.1	[T] COG2200 FOG: EAL domain. (256 aa)
	AOF96974.1	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. (760 aa)
	AOF95596.1	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. (935 aa)
	AOF95698.1	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. (765 aa)
	AOF96722.1	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. (553 aa)
	AOF96008.1	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. (660 aa)
	BSY17_257	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. (767 aa)
	BSY17_527	GGDEF: diguanylate cyclase domain protein; [T] COG2200 FOG: EAL domain. (684 aa)

Your Current Organism:

Sphingobium sp. RAC03

NCBI taxonomy Id: 1843368
Other names: S. sp. RAC03

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOF95596.1	AOF96008.1	BSY17_1736	BSY17_2557	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.406
AOF95596.1	AOF96557.1	BSY17_1736	BSY17_1261	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	[T] COG2200 FOG: EAL domain.	0.499
AOF95596.1	AOF96722.1	BSY17_1736	BSY17_2511	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.777
AOF95596.1	BSY17_257	BSY17_1736	BSY17_257	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.717
AOF95596.1	BSY17_527	BSY17_1736	BSY17_527	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	GGDEF: diguanylate cyclase domain protein; [T] COG2200 FOG: EAL domain.	0.786
AOF95596.1	BSY17_892	BSY17_1736	BSY17_892	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.501
AOF95698.1	AOF96722.1	BSY17_2201	BSY17_2511	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.500
AOF95698.1	BSY17_527	BSY17_2201	BSY17_527	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	GGDEF: diguanylate cyclase domain protein; [T] COG2200 FOG: EAL domain.	0.528
AOF96008.1	AOF95596.1	BSY17_2557	BSY17_1736	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.406
AOF96008.1	AOF96557.1	BSY17_2557	BSY17_1261	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	[T] COG2200 FOG: EAL domain.	0.429
AOF96008.1	AOF96722.1	BSY17_2557	BSY17_2511	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.730
AOF96008.1	BSY17_257	BSY17_2557	BSY17_257	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.498
AOF96008.1	BSY17_527	BSY17_2557	BSY17_527	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	GGDEF: diguanylate cyclase domain protein; [T] COG2200 FOG: EAL domain.	0.741
AOF96557.1	AOF95596.1	BSY17_1261	BSY17_1736	[T] COG2200 FOG: EAL domain.	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.499
AOF96557.1	AOF96008.1	BSY17_1261	BSY17_2557	[T] COG2200 FOG: EAL domain.	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.429
AOF96557.1	AOF96722.1	BSY17_1261	BSY17_2511	[T] COG2200 FOG: EAL domain.	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.429
AOF96557.1	BSY17_257	BSY17_1261	BSY17_257	[T] COG2200 FOG: EAL domain.	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.693
AOF96557.1	BSY17_527	BSY17_1261	BSY17_527	[T] COG2200 FOG: EAL domain.	GGDEF: diguanylate cyclase domain protein; [T] COG2200 FOG: EAL domain.	0.415
AOF96557.1	BSY17_892	BSY17_1261	BSY17_892	[T] COG2200 FOG: EAL domain.	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.483
AOF96722.1	AOF95596.1	BSY17_2511	BSY17_1736	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.777