Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OAG67662.1 | OAG67991.1 | A7D17_15855 | A7D17_02135 | DNA methylase N-4; Derived by automated computational analysis using gene prediction method: Protein Homology. | Exodeoxyribonuclease IX; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.936 |
| OAG67662.1 | OAG68213.1 | A7D17_15855 | A7D17_15275 | DNA methylase N-4; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA helicase II; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.617 |
| OAG67662.1 | OAG68790.1 | A7D17_15855 | A7D17_11755 | DNA methylase N-4; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.963 |
| OAG67662.1 | OAG69491.1 | A7D17_15855 | A7D17_01400 | DNA methylase N-4; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.863 |
| OAG67662.1 | OAG69526.1 | A7D17_15855 | A7D17_01315 | DNA methylase N-4; Derived by automated computational analysis using gene prediction method: Protein Homology. | Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.803 |
| OAG67662.1 | dinG | A7D17_15855 | A7D17_10575 | DNA methylase N-4; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | 0.803 |
| OAG67662.1 | polA | A7D17_15855 | A7D17_15075 | DNA methylase N-4; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.972 |
| OAG67662.1 | topA | A7D17_15855 | A7D17_13370 | DNA methylase N-4; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.810 |
| OAG67991.1 | OAG67662.1 | A7D17_02135 | A7D17_15855 | Exodeoxyribonuclease IX; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA methylase N-4; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.936 |
| OAG67991.1 | OAG68213.1 | A7D17_02135 | A7D17_15275 | Exodeoxyribonuclease IX; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA helicase II; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.680 |
| OAG67991.1 | OAG68790.1 | A7D17_02135 | A7D17_11755 | Exodeoxyribonuclease IX; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.992 |
| OAG67991.1 | OAG69491.1 | A7D17_02135 | A7D17_01400 | Exodeoxyribonuclease IX; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.982 |
| OAG67991.1 | OAG69526.1 | A7D17_02135 | A7D17_01315 | Exodeoxyribonuclease IX; Derived by automated computational analysis using gene prediction method: Protein Homology. | Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.891 |
| OAG67991.1 | dinG | A7D17_02135 | A7D17_10575 | Exodeoxyribonuclease IX; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | 0.891 |
| OAG67991.1 | mutL | A7D17_02135 | A7D17_06930 | Exodeoxyribonuclease IX; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.984 |
| OAG67991.1 | mutS | A7D17_02135 | A7D17_03055 | Exodeoxyribonuclease IX; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.984 |
| OAG67991.1 | polA | A7D17_02135 | A7D17_15075 | Exodeoxyribonuclease IX; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.965 |
| OAG67991.1 | topA | A7D17_02135 | A7D17_13370 | Exodeoxyribonuclease IX; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.898 |
| OAG68213.1 | OAG67662.1 | A7D17_15275 | A7D17_15855 | DNA helicase II; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA methylase N-4; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.617 |
| OAG68213.1 | OAG67991.1 | A7D17_15275 | A7D17_02135 | DNA helicase II; Derived by automated computational analysis using gene prediction method: Protein Homology. | Exodeoxyribonuclease IX; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.680 |
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