STRINGSTRING
OIJ28685.1 OIJ28685.1 aroC aroC aroK aroK aroB aroB aroQ aroQ pat pat OIJ27200.1 OIJ27200.1 OIJ26518.1 OIJ26518.1 OIJ26519.1 OIJ26519.1 OIJ26520.1 OIJ26520.1 lgt lgt OIJ25885.1 OIJ25885.1 trpA trpA trpB trpB trpC trpC OIJ25961.1 OIJ25961.1 OIJ25796.1 OIJ25796.1 OIJ25618.1 OIJ25618.1 OIJ25027.1 OIJ25027.1 trpD trpD aroA aroA OIJ24249.1 OIJ24249.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OIJ28685.1Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the shikimate dehydrogenase family. (278 aa)
aroCChorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. (392 aa)
aroKShikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. (171 aa)
aroB3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). (365 aa)
aroQ3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. (151 aa)
patHistidinol-phosphate transaminase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. (359 aa)
OIJ27200.1Prephenate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa)
OIJ26518.1Phenazine-specific anthranilate synthase component I; Derived by automated computational analysis using gene prediction method: Protein Homology. (646 aa)
OIJ26519.1Anthranilate synthase component II; Derived by automated computational analysis using gene prediction method: Protein Homology. (192 aa)
OIJ26520.1Aminodeoxychorismate component I; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa)
lgtProlipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. (319 aa)
OIJ25885.1Electron transport protein SCO1/SenC; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)
trpATryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. (265 aa)
trpBTryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (414 aa)
trpCIndole-3-glycerol phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TrpC family. (260 aa)
OIJ25961.13-deoxy-7-phosphoheptulonate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II DAHP synthase family. (446 aa)
OIJ25796.1Prephenate dehydratase; Catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)
OIJ25618.1Anthranilate synthase component II; Derived by automated computational analysis using gene prediction method: Protein Homology. (196 aa)
OIJ25027.1Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa)
trpDAnthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). (345 aa)
aroA3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. (416 aa)
OIJ24249.1Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (99 aa)
Your Current Organism:
Nocardioides luteus
NCBI taxonomy Id: 1844
Other names: ATCC 43052, CCUG 37986, CIP 103450, DSM 43366, IFO 14491, IMET 7830, JCM 3358, KCTC 9575, LMG 16209, LMG:16209, N. luteus, NBRC 14491
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