6 items (Nocardioides luteus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OIJ27788.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (577 aa)
	OIJ27789.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (604 aa)
	OIJ27790.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (592 aa)
	OIJ26765.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (445 aa)
	OIJ26766.1	DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
	OIJ26615.1	DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)

Your Current Organism:

Nocardioides luteus

NCBI taxonomy Id: 1844
Other names: ATCC 43052, CCUG 37986, CIP 103450, DSM 43366, IFO 14491, IMET 7830, JCM 3358, KCTC 9575, LMG 16209, LMG:16209, N. luteus, NBRC 14491

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OIJ26615.1	OIJ26765.1	UG56_011640	UG56_011025	DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.878
OIJ26615.1	OIJ27788.1	UG56_011640	UG56_005360	DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.876
OIJ26615.1	OIJ27789.1	UG56_011640	UG56_005365	DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.894
OIJ26615.1	OIJ27790.1	UG56_011640	UG56_005370	DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.863
OIJ26765.1	OIJ26615.1	UG56_011025	UG56_011640	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.878
OIJ26765.1	OIJ26766.1	UG56_011025	UG56_011030	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.971
OIJ26765.1	OIJ27788.1	UG56_011025	UG56_005360	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.796
OIJ26765.1	OIJ27789.1	UG56_011025	UG56_005365	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.524
OIJ26765.1	OIJ27790.1	UG56_011025	UG56_005370	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.788
OIJ26766.1	OIJ26765.1	UG56_011030	UG56_011025	DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.971
OIJ26766.1	OIJ27788.1	UG56_011030	UG56_005360	DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.875
OIJ26766.1	OIJ27789.1	UG56_011030	UG56_005365	DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.894
OIJ26766.1	OIJ27790.1	UG56_011030	UG56_005370	DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.863
OIJ27788.1	OIJ26615.1	UG56_005360	UG56_011640	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.876
OIJ27788.1	OIJ26765.1	UG56_005360	UG56_011025	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.796
OIJ27788.1	OIJ26766.1	UG56_005360	UG56_011030	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.875
OIJ27788.1	OIJ27789.1	UG56_005360	UG56_005365	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.567
OIJ27788.1	OIJ27790.1	UG56_005360	UG56_005370	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.589
OIJ27789.1	OIJ26615.1	UG56_005365	UG56_011640	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.894
OIJ27789.1	OIJ26765.1	UG56_005365	UG56_011025	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.524

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