28 items (Nocardioides luteus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OIJ24181.1	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (361 aa)
	OIJ24236.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (885 aa)
	OIJ24258.1	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (493 aa)
	OIJ24719.1	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (471 aa)
	OIJ24836.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (1101 aa)
	OIJ24916.1	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
	OIJ25097.1	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (477 aa)
	OIJ25140.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (530 aa)
	OIJ25584.1	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa)
	OIJ26344.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (555 aa)
	OIJ26555.1	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (474 aa)
	OIJ27788.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (577 aa)
	OIJ28494.1	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (505 aa)
	OIJ23793.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (534 aa)
	OIJ23748.1	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (538 aa)
	OIJ23689.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (290 aa)
	OIJ23654.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (412 aa)
	OIJ23578.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (413 aa)
	OIJ26576.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)
	OIJ26765.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (445 aa)
	OIJ26920.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (844 aa)
	OIJ27157.1	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)
	OIJ27278.1	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
	OIJ27705.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (443 aa)
	OIJ27790.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (592 aa)
	OIJ27789.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (604 aa)
	OIJ23872.1	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (486 aa)
	OIJ24083.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (225 aa)

Your Current Organism:

Nocardioides luteus

NCBI taxonomy Id: 1844
Other names: ATCC 43052, CCUG 37986, CIP 103450, DSM 43366, IFO 14491, IMET 7830, JCM 3358, KCTC 9575, LMG 16209, LMG:16209, N. luteus, NBRC 14491

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OIJ23578.1	OIJ28494.1	UG56_027205	UG56_001550	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.488
OIJ23654.1	OIJ28494.1	UG56_026770	UG56_001550	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.488
OIJ23689.1	OIJ23872.1	UG56_026660	UG56_025755	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.439
OIJ23689.1	OIJ24916.1	UG56_026660	UG56_020085	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.446
OIJ23689.1	OIJ25097.1	UG56_026660	UG56_019485	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.502
OIJ23689.1	OIJ26765.1	UG56_026660	UG56_011025	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.670
OIJ23689.1	OIJ27788.1	UG56_026660	UG56_005360	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.401
OIJ23689.1	OIJ27790.1	UG56_026660	UG56_005370	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.439
OIJ23689.1	OIJ28494.1	UG56_026660	UG56_001550	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.931
OIJ23748.1	OIJ24236.1	UG56_026350	UG56_023845	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.639
OIJ23748.1	OIJ24916.1	UG56_026350	UG56_020085	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.402
OIJ23748.1	OIJ27788.1	UG56_026350	UG56_005360	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.429
OIJ23748.1	OIJ27790.1	UG56_026350	UG56_005370	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.408
OIJ23748.1	OIJ28494.1	UG56_026350	UG56_001550	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.920
OIJ23793.1	OIJ28494.1	UG56_026055	UG56_001550	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.533
OIJ23872.1	OIJ23689.1	UG56_025755	UG56_026660	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.439
OIJ23872.1	OIJ24236.1	UG56_025755	UG56_023845	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.647
OIJ23872.1	OIJ27705.1	UG56_025755	UG56_006820	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.422
OIJ23872.1	OIJ28494.1	UG56_025755	UG56_001550	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.935
OIJ24083.1	OIJ28494.1	UG56_024425	UG56_001550	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.920

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