(75 nodes) Cationic antimicrobial peptide (CAMP) resistance network (Muricauda sp. CP2A)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GCA_001683915_02279	Unannotated protein. (375 aa)
	GCA_001683915_00218	Unannotated protein. (320 aa)
	GCA_001683915_00238	Unannotated protein. (251 aa)
	GCA_001683915_00253	Unannotated protein. (446 aa)
	GCA_001683915_00300	Unannotated protein. (434 aa)
	GCA_001683915_00301	Unannotated protein. (363 aa)
	GCA_001683915_00302	Unannotated protein. (1064 aa)
	GCA_001683915_00402	Unannotated protein. (359 aa)
	GCA_001683915_00483	Unannotated protein. (182 aa)
	GCA_001683915_00484	Unannotated protein. (368 aa)
	GCA_001683915_00515	Unannotated protein. (110 aa)
	GCA_001683915_00600	Unannotated protein. (1048 aa)
	GCA_001683915_00601	Unannotated protein. (371 aa)
	GCA_001683915_00644	Unannotated protein. (271 aa)
	GCA_001683915_00645	Unannotated protein. (139 aa)
	GCA_001683915_00694	Unannotated protein. (151 aa)
	GCA_001683915_00701	Unannotated protein. (405 aa)
	GCA_001683915_00719	Unannotated protein. (481 aa)
	GCA_001683915_00890	Unannotated protein. (321 aa)
	GCA_001683915_00937	Unannotated protein. (240 aa)
	GCA_001683915_01036	Unannotated protein. (591 aa)
	GCA_001683915_01115	Unannotated protein. (128 aa)
	GCA_001683915_01143	Unannotated protein. (399 aa)
	GCA_001683915_01210	Unannotated protein. (166 aa)
	GCA_001683915_01261	Unannotated protein. (441 aa)
	GCA_001683915_01262	Unannotated protein. (1095 aa)
	GCA_001683915_01263	Unannotated protein. (378 aa)
	GCA_001683915_01316	Unannotated protein. (178 aa)
	GCA_001683915_01332	Unannotated protein. (462 aa)
	GCA_001683915_01390	Unannotated protein. (260 aa)
	GCA_001683915_01454	Unannotated protein. (261 aa)
	GCA_001683915_01492	Unannotated protein. (201 aa)
	GCA_001683915_01493	Unannotated protein. (160 aa)
	GCA_001683915_01515	Unannotated protein. (249 aa)
	GCA_001683915_01518	Unannotated protein. (108 aa)
	GCA_001683915_01529	Unannotated protein. (1112 aa)
	GCA_001683915_01613	Unannotated protein. (182 aa)
	GCA_001683915_01651	Unannotated protein. (1051 aa)
	GCA_001683915_01652	Unannotated protein. (402 aa)
	GCA_001683915_01693	Unannotated protein. (308 aa)
	GCA_001683915_01747	Unannotated protein. (250 aa)
	GCA_001683915_01806	Unannotated protein. (446 aa)
	GCA_001683915_01807	Unannotated protein. (354 aa)
	GCA_001683915_01808	Unannotated protein. (1056 aa)
	GCA_001683915_01885	Unannotated protein. (465 aa)
	GCA_001683915_01971	Unannotated protein. (1056 aa)
	GCA_001683915_01972	Unannotated protein. (354 aa)
	GCA_001683915_01973	Unannotated protein. (446 aa)
	GCA_001683915_02055	Unannotated protein. (310 aa)
	GCA_001683915_02128	Unannotated protein. (314 aa)
	GCA_001683915_02268	Unannotated protein. (1164 aa)
	GCA_001683915_02269	Unannotated protein. (394 aa)
	GCA_001683915_02270	Unannotated protein. (443 aa)
	GCA_001683915_02395	Unannotated protein. (211 aa)
	GCA_001683915_02416	Unannotated protein. (501 aa)
	GCA_001683915_02488	Unannotated protein. (436 aa)
	GCA_001683915_02489	Unannotated protein. (1032 aa)
	GCA_001683915_02490	Unannotated protein. (358 aa)
	GCA_001683915_02589	Unannotated protein. (470 aa)
	GCA_001683915_02638	Unannotated protein. (284 aa)
	GCA_001683915_02677	Unannotated protein. (290 aa)
	GCA_001683915_02678	Unannotated protein. (552 aa)
	GCA_001683915_02996	Unannotated protein. (327 aa)
	GCA_001683915_02997	Unannotated protein. (1088 aa)
	GCA_001683915_03020	Unannotated protein. (721 aa)
	GCA_001683915_03054	Unannotated protein. (419 aa)
	GCA_001683915_03140	Unannotated protein. (270 aa)
	GCA_001683915_03173	Unannotated protein. (535 aa)
	GCA_001683915_03189	Unannotated protein. (691 aa)
	GCA_001683915_03241	Unannotated protein. (336 aa)
	GCA_001683915_03492	Unannotated protein. (154 aa)
	GCA_001683915_03504	Unannotated protein. (312 aa)
	GCA_001683915_03523	Unannotated protein. (334 aa)
	GCA_001683915_03592	Unannotated protein. (353 aa)
	GCA_001683915_03714	Unannotated protein. (446 aa)

Your Current Organism:

Muricauda sp. CP2A

NCBI taxonomy Id: 1848189
Other names: M. sp. CP2A

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
GCA_001683915_00253	GCA_001683915_00301	Unannotated protein.	Unannotated protein.	0.711
GCA_001683915_00253	GCA_001683915_00302	Unannotated protein.	Unannotated protein.	0.586
GCA_001683915_00253	GCA_001683915_00600	Unannotated protein.	Unannotated protein.	0.586
GCA_001683915_00253	GCA_001683915_00601	Unannotated protein.	Unannotated protein.	0.841
GCA_001683915_00253	GCA_001683915_01143	Unannotated protein.	Unannotated protein.	0.690
GCA_001683915_00253	GCA_001683915_01262	Unannotated protein.	Unannotated protein.	0.586
GCA_001683915_00253	GCA_001683915_01263	Unannotated protein.	Unannotated protein.	0.819
GCA_001683915_00253	GCA_001683915_01651	Unannotated protein.	Unannotated protein.	0.586
GCA_001683915_00253	GCA_001683915_01652	Unannotated protein.	Unannotated protein.	0.797
GCA_001683915_00253	GCA_001683915_01807	Unannotated protein.	Unannotated protein.	0.711
GCA_001683915_00253	GCA_001683915_01808	Unannotated protein.	Unannotated protein.	0.586
GCA_001683915_00253	GCA_001683915_01885	Unannotated protein.	Unannotated protein.	0.751
GCA_001683915_00253	GCA_001683915_01971	Unannotated protein.	Unannotated protein.	0.586
GCA_001683915_00253	GCA_001683915_01972	Unannotated protein.	Unannotated protein.	0.711
GCA_001683915_00253	GCA_001683915_02268	Unannotated protein.	Unannotated protein.	0.586
GCA_001683915_00253	GCA_001683915_02269	Unannotated protein.	Unannotated protein.	0.819
GCA_001683915_00253	GCA_001683915_02270	Unannotated protein.	Unannotated protein.	0.665
GCA_001683915_00253	GCA_001683915_02279	Unannotated protein.	Unannotated protein.	0.690
GCA_001683915_00253	GCA_001683915_02416	Unannotated protein.	Unannotated protein.	0.690
GCA_001683915_00253	GCA_001683915_02488	Unannotated protein.	Unannotated protein.	0.728