STRINGSTRING
AOT05390.1 AOT05390.1 AOT03850.1 AOT03850.1 AOT04516.1 AOT04516.1 AOT04770.1 AOT04770.1 AOT05188.1 AOT05188.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AOT05390.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
AOT03850.1Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
AOT04516.1Non-heme iron oxygenase ferredoxin subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (119 aa)
AOT04770.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (303 aa)
AOT05188.1Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (414 aa)
Your Current Organism:
Arthrobacter sp. U41
NCBI taxonomy Id: 1849032
Other names: A. sp. U41
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