STRINGSTRING
BP6252_12566 BP6252_12566 BP6252_10341 BP6252_10341 BP6252_09778 BP6252_09778 BP6252_09374 BP6252_09374 BP6252_08529 BP6252_08529 BP6252_07920 BP6252_07920 BP6252_07096 BP6252_07096 BP6252_07095 BP6252_07095 BP6252_07228 BP6252_07228 BP6252_06407 BP6252_06407 BP6252_05230 BP6252_05230 BP6252_04269 BP6252_04269 BP6252_03595 BP6252_03595 BP6252_02058 BP6252_02058 BP6252_02518 BP6252_02518 BP6252_00907 BP6252_00907 BP6252_01101 BP6252_01101 BP6252_01107 BP6252_01107
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BP6252_12566SNF5-domain-containing protein. (719 aa)
BP6252_10341SWIB domain-containing protein. (260 aa)
BP6252_09778SWIB domain-containing protein. (500 aa)
BP6252_09374Uncharacterized protein. (985 aa)
BP6252_08529Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (169 aa)
BP6252_07920WW domain-containing protein. (415 aa)
BP6252_07096Uncharacterized protein. (349 aa)
BP6252_07095Uncharacterized protein. (313 aa)
BP6252_07228Uncharacterized protein. (201 aa)
BP6252_06407Uncharacterized protein. (916 aa)
BP6252_05230Putative SWI and RSC complex subunit arp9; Belongs to the actin family. (697 aa)
BP6252_04269SWI complex-like protein. (681 aa)
BP6252_03595But2 domain-containing protein. (544 aa)
BP6252_02058Putative chromatin structure-remodeling complex subunit snf21. (1417 aa)
BP6252_02518ARID domain-containing protein. (1044 aa)
BP6252_00907Uncharacterized protein. (650 aa)
BP6252_01101Uncharacterized protein. (506 aa)
BP6252_01107Uncharacterized protein. (600 aa)
Your Current Organism:
Coleophoma cylindrospora
NCBI taxonomy Id: 1849047
Other names: C. cylindrospora, Coleophoma sp. CBS 449.70, Macrophoma cylindrospora, Phoma cylindrospora, Sphaeropsis cylindrospora
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