(20 nodes) Mixed, incl. Nuclear Receptor transcription pathway, and Protein-arginine omega-N asymmetric methyltransferase activity network (Coleophoma cylindrospora)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BP6252_13996	CFEM protein. (542 aa)
	BP6252_13612	Uncharacterized protein. (608 aa)
	BP6252_13274	Uncharacterized protein. (413 aa)
	BP6252_11439	Uncharacterized protein. (342 aa)
	BP6252_09734	GH16 domain-containing protein. (324 aa)
	BP6252_09781	Putative histone-arginine methyltransferase CARM1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (551 aa)
	BP6252_09860	BHLH domain-containing protein. (584 aa)
	BP6252_08478	Uncharacterized protein. (517 aa)
	BP6252_08033	Uncharacterized protein. (347 aa)
	BP6252_08162	Uncharacterized protein. (615 aa)
	BP6252_08163	Uncharacterized protein. (240 aa)
	BP6252_06801	Uncharacterized protein. (256 aa)
	BP6252_03579	Bromo domain-containing protein. (1045 aa)
	BP6252_03672	Uncharacterized protein. (576 aa)
	BP6252_03806	Fork-head domain-containing protein. (385 aa)
	BP6252_03840	Uncharacterized protein. (370 aa)
	BP6252_02259	BHLH domain-containing protein. (260 aa)
	BP6252_02344	tRNA_int_endo domain-containing protein. (585 aa)
	BP6252_00258	GH16 domain-containing protein. (561 aa)
	BP6252_00883	Uncharacterized protein. (855 aa)

Your Current Organism:

Coleophoma cylindrospora

NCBI taxonomy Id: 1849047
Other names: C. cylindrospora, Coleophoma sp. CBS 449.70, Macrophoma cylindrospora, Phoma cylindrospora, Sphaeropsis cylindrospora

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BP6252_00258	BP6252_00883	A0A3D8SPK2	A0A3D8SRQ0	GH16 domain-containing protein.	Uncharacterized protein.	0.688
BP6252_00258	BP6252_02344	A0A3D8SPK2	A0A3D8SF60	GH16 domain-containing protein.	tRNA_int_endo domain-containing protein.	0.502
BP6252_00258	BP6252_03579	A0A3D8SPK2	A0A3D8S811	GH16 domain-containing protein.	Bromo domain-containing protein.	0.428
BP6252_00258	BP6252_03672	A0A3D8SPK2	A0A3D8S8K6	GH16 domain-containing protein.	Uncharacterized protein.	0.688
BP6252_00258	BP6252_03840	A0A3D8SPK2	A0A3D8SAA4	GH16 domain-containing protein.	Uncharacterized protein.	0.688
BP6252_00258	BP6252_06801	A0A3D8SPK2	A0A3D8RGA1	GH16 domain-containing protein.	Uncharacterized protein.	0.829
BP6252_00258	BP6252_08033	A0A3D8SPK2	A0A3D8RBV9	GH16 domain-containing protein.	Uncharacterized protein.	0.502
BP6252_00258	BP6252_08162	A0A3D8SPK2	A0A3D8RC16	GH16 domain-containing protein.	Uncharacterized protein.	0.688
BP6252_00258	BP6252_08163	A0A3D8SPK2	A0A3D8RC91	GH16 domain-containing protein.	Uncharacterized protein.	0.688
BP6252_00258	BP6252_08478	A0A3D8SPK2	A0A3D8R672	GH16 domain-containing protein.	Uncharacterized protein.	0.502
BP6252_00258	BP6252_09781	A0A3D8SPK2	A0A3D8QWH8	GH16 domain-containing protein.	Putative histone-arginine methyltransferase CARM1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.658
BP6252_00258	BP6252_11439	A0A3D8SPK2	A0A3D8QJK5	GH16 domain-containing protein.	Uncharacterized protein.	0.502
BP6252_00258	BP6252_13274	A0A3D8SPK2	A0A3D8QB18	GH16 domain-containing protein.	Uncharacterized protein.	0.502
BP6252_00258	BP6252_13612	A0A3D8SPK2	A0A3D8Q8S6	GH16 domain-containing protein.	Uncharacterized protein.	0.829
BP6252_00258	BP6252_13996	A0A3D8SPK2	A0A3D8Q4I4	GH16 domain-containing protein.	CFEM protein.	0.502
BP6252_00883	BP6252_00258	A0A3D8SRQ0	A0A3D8SPK2	Uncharacterized protein.	GH16 domain-containing protein.	0.688
BP6252_00883	BP6252_02259	A0A3D8SRQ0	A0A3D8SEC8	Uncharacterized protein.	BHLH domain-containing protein.	0.575
BP6252_00883	BP6252_02344	A0A3D8SRQ0	A0A3D8SF60	Uncharacterized protein.	tRNA_int_endo domain-containing protein.	0.704
BP6252_00883	BP6252_03579	A0A3D8SRQ0	A0A3D8S811	Uncharacterized protein.	Bromo domain-containing protein.	0.493
BP6252_00883	BP6252_06801	A0A3D8SRQ0	A0A3D8RGA1	Uncharacterized protein.	Uncharacterized protein.	0.763