STRINGSTRING
BP6252_12219 BP6252_12219 BP6252_09716 BP6252_09716 BP6252_09431 BP6252_09431 BP6252_07749 BP6252_07749 BP6252_07089 BP6252_07089 BP6252_03165 BP6252_03165 BP6252_03745 BP6252_03745 BP6252_01872 BP6252_01872 BP6252_00375 BP6252_00375 BP6252_00378 BP6252_00378 BP6252_01600 BP6252_01600
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BP6252_12219Putative transcription initiation factor TFIID subunit 13. (142 aa)
BP6252_09716Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (206 aa)
BP6252_09431TFIID_20kDa domain-containing protein. (634 aa)
BP6252_07749Uncharacterized protein. (704 aa)
BP6252_07089Uncharacterized protein. (1487 aa)
BP6252_03165Uncharacterized protein. (307 aa)
BP6252_03745DUF3591 domain-containing protein. (1074 aa)
BP6252_01872TAFII55_N domain-containing protein. (539 aa)
BP6252_00375Histone-fold containing protein. (463 aa)
BP6252_00378Histone-fold containing protein. (322 aa)
BP6252_01600SH3 domain-containing protein. (887 aa)
Your Current Organism:
Coleophoma cylindrospora
NCBI taxonomy Id: 1849047
Other names: C. cylindrospora, Coleophoma sp. CBS 449.70, Macrophoma cylindrospora, Phoma cylindrospora, Sphaeropsis cylindrospora
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