(4 nodes) Holliday junction resolvase complex network (Coleophoma cylindrospora)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BP6252_09730	Uncharacterized protein. (496 aa)
	BP6252_10530	Uncharacterized protein. (843 aa)
	BP6252_09704	ERCC4 domain-containing protein. (679 aa)
	BP6252_01298	ERCC4 domain-containing protein. (582 aa)

Your Current Organism:

Coleophoma cylindrospora

NCBI taxonomy Id: 1849047
Other names: C. cylindrospora, Coleophoma sp. CBS 449.70, Macrophoma cylindrospora, Phoma cylindrospora, Sphaeropsis cylindrospora

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BP6252_01298	BP6252_09704	A0A3D8SSI4	A0A3D8QWD2	ERCC4 domain-containing protein.	ERCC4 domain-containing protein.	0.929
BP6252_01298	BP6252_09730	A0A3D8SSI4	A0A3D8QWE2	ERCC4 domain-containing protein.	Uncharacterized protein.	0.889
BP6252_01298	BP6252_10530	A0A3D8SSI4	A0A3D8QST7	ERCC4 domain-containing protein.	Uncharacterized protein.	0.868
BP6252_09704	BP6252_01298	A0A3D8QWD2	A0A3D8SSI4	ERCC4 domain-containing protein.	ERCC4 domain-containing protein.	0.929
BP6252_09730	BP6252_01298	A0A3D8QWE2	A0A3D8SSI4	Uncharacterized protein.	ERCC4 domain-containing protein.	0.889
BP6252_10530	BP6252_01298	A0A3D8QST7	A0A3D8SSI4	Uncharacterized protein.	ERCC4 domain-containing protein.	0.868