(20 nodes) SAGA-type complex network (Coleophoma cylindrospora)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BP6252_13417	ArAE_2 domain-containing protein. (1064 aa)
	BP6252_13547	ArAE_2_N domain-containing protein. (1030 aa)
	BP6252_13561	Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation. (591 aa)
	BP6252_13415	Uncharacterized protein. (451 aa)
	BP6252_12569	SCA7 domain-containing protein. (447 aa)
	BP6252_11609	SWIRM domain-containing protein. (387 aa)
	BP6252_11704	WD40 repeat-like protein. (667 aa)
	BP6252_11859	Uncharacterized protein. (1024 aa)
	BP6252_09716	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (206 aa)
	BP6252_09388	Bromo domain-containing protein. (1135 aa)
	BP6252_09439	SCA7 domain-containing protein. (177 aa)
	BP6252_08185	Uncharacterized protein. (993 aa)
	BP6252_08179	SGF29 C-terminal domain-containing protein. (436 aa)
	BP6252_06962	Uncharacterized protein. (670 aa)
	BP6252_07111	TFIID-domain-containing protein. (246 aa)
	BP6252_06124	Uncharacterized protein. (963 aa)
	BP6252_04162	Uncharacterized protein. (315 aa)
	BP6252_04845	C2H2-type domain-containing protein. (958 aa)
	BP6252_03006	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3862 aa)
	BP6252_00686	Uncharacterized protein. (1087 aa)

Your Current Organism:

Coleophoma cylindrospora

NCBI taxonomy Id: 1849047
Other names: C. cylindrospora, Coleophoma sp. CBS 449.70, Macrophoma cylindrospora, Phoma cylindrospora, Sphaeropsis cylindrospora

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BP6252_00686	BP6252_03006	A0A3D8SR09	A0A3D8S775	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.722
BP6252_00686	BP6252_04162	A0A3D8SR09	A0A3D8S0A1	Uncharacterized protein.	Uncharacterized protein.	0.713
BP6252_00686	BP6252_06962	A0A3D8SR09	A0A3D8RG74	Uncharacterized protein.	Uncharacterized protein.	0.692
BP6252_00686	BP6252_07111	A0A3D8SR09	A0A3D8RH38	Uncharacterized protein.	TFIID-domain-containing protein.	0.691
BP6252_00686	BP6252_08179	A0A3D8SR09	A0A3D8RCD7	Uncharacterized protein.	SGF29 C-terminal domain-containing protein.	0.688
BP6252_00686	BP6252_09388	A0A3D8SR09	A0A3D8R1S2	Uncharacterized protein.	Bromo domain-containing protein.	0.412
BP6252_00686	BP6252_09439	A0A3D8SR09	A0A3D8R1X8	Uncharacterized protein.	SCA7 domain-containing protein.	0.523
BP6252_00686	BP6252_09716	A0A3D8SR09	A0A3D8QWL0	Uncharacterized protein.	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]	0.650
BP6252_00686	BP6252_12569	A0A3D8SR09	A0A3D8QCA3	Uncharacterized protein.	SCA7 domain-containing protein.	0.523
BP6252_00686	BP6252_13561	A0A3D8SR09	A0A3D8Q909	Uncharacterized protein.	Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.	0.590
BP6252_03006	BP6252_00686	A0A3D8S775	A0A3D8SR09	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.722
BP6252_03006	BP6252_04162	A0A3D8S775	A0A3D8S0A1	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.994
BP6252_03006	BP6252_06962	A0A3D8S775	A0A3D8RG74	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.997
BP6252_03006	BP6252_07111	A0A3D8S775	A0A3D8RH38	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	TFIID-domain-containing protein.	0.998
BP6252_03006	BP6252_08179	A0A3D8S775	A0A3D8RCD7	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	SGF29 C-terminal domain-containing protein.	0.994
BP6252_03006	BP6252_08185	A0A3D8S775	A0A3D8RC54	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.722
BP6252_03006	BP6252_09388	A0A3D8S775	A0A3D8R1S2	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Bromo domain-containing protein.	0.993
BP6252_03006	BP6252_09439	A0A3D8S775	A0A3D8R1X8	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	SCA7 domain-containing protein.	0.963
BP6252_03006	BP6252_09716	A0A3D8S775	A0A3D8QWL0	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]	0.996
BP6252_03006	BP6252_11704	A0A3D8S775	A0A3D8QKM6	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	WD40 repeat-like protein.	0.901