(30 nodes) Mixed, incl. Nuclear transport, and Gamma-tubulin complex component protein network (Giardia lamblia ATCC 50803)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GL50803_5489	Kinase, NEK-frag. (536 aa)
	GL50803_42368	Spindle pole body component. (853 aa)
	GL50803_112408	Nucleoporin_N domain-containing protein. (1853 aa)
	GL50803_13467	Uncharacterized protein. (310 aa)
	GL50803_15218	WD-40 repeat protein. (787 aa)
	GL50803_7240	Nup54 domain-containing protein. (330 aa)
	GL50803_16973	Uncharacterized protein. (520 aa)
	GL50803_16969	RAN binding protein 1. (166 aa)
	GL50803_15106	Importin beta-3 subunit. (1151 aa)
	GL50803_6724	Protein F17L21.10. (122 aa)
	GL50803_11867	Coiled-coil protein. (398 aa)
	GL50803_17429	Spindle pole body component. (985 aa)
	GL50803_16279	Kinase, NEK. (661 aa)
	GL50803_12057	Spindle pole body component. (892 aa)
	GL50803_93278	Importin N-terminal domain-containing protein. (1055 aa)
	GL50803_15409	Kinase, NEK. (515 aa)
	GL50803_3598	RRM Nup35-type domain-containing protein. (186 aa)
	GL50803_5672	Uncharacterized protein. (805 aa)
	GL50803_4789	C-CAP/cofactor C-like domain-containing protein. (552 aa)
	GL50803_9520	Uncharacterized protein. (65 aa)
	GL50803_114218	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. (491 aa)
	GL50803_16202	Axoneme central apparatus protein. (502 aa)
	GL50803_4692	Uncharacterized protein. (239 aa)
	GL50803_6138	Peptidase S59 domain-containing protein. (162 aa)
	GL50803_15869	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (226 aa)
	GL50803_41512	Flagella associated protein. (647 aa)
	GL50803_14327	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (304 aa)
	GL50803_92498	Kinase, NEK. (898 aa)
	GL50803_8038	Peptidase S59 domain-containing protein. (421 aa)
	GL50803_4689	Uncharacterized protein. (217 aa)

Your Current Organism:

Giardia lamblia ATCC 50803

NCBI taxonomy Id: 184922
Other names: G. lamblia ATCC 50803, Giardia intestinalis ATCC 50803

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GL50803_112408	GL50803_15106	A8B474	A8B9C0	Nucleoporin_N domain-containing protein.	Importin beta-3 subunit.	0.418
GL50803_112408	GL50803_15218	A8B474	A8B754	Nucleoporin_N domain-containing protein.	WD-40 repeat protein.	0.537
GL50803_112408	GL50803_15869	A8B474	A8BS62	Nucleoporin_N domain-containing protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.657
GL50803_112408	GL50803_16202	A8B474	A8BQI0	Nucleoporin_N domain-containing protein.	Axoneme central apparatus protein.	0.426
GL50803_112408	GL50803_16969	A8B474	A8B911	Nucleoporin_N domain-containing protein.	RAN binding protein 1.	0.979
GL50803_112408	GL50803_3598	A8B474	A8BL17	Nucleoporin_N domain-containing protein.	RRM Nup35-type domain-containing protein.	0.999
GL50803_112408	GL50803_6138	A8B474	A8BRG2	Nucleoporin_N domain-containing protein.	Peptidase S59 domain-containing protein.	0.945
GL50803_112408	GL50803_8038	A8B474	A8BZA0	Nucleoporin_N domain-containing protein.	Peptidase S59 domain-containing protein.	0.945
GL50803_114218	GL50803_12057	A8BQF3	A8BFK8	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	Spindle pole body component.	0.995
GL50803_114218	GL50803_17429	A8BQF3	A8BD62	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	Spindle pole body component.	0.995
GL50803_114218	GL50803_42368	A8BQF3	A8B367	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	Spindle pole body component.	0.540
GL50803_11867	GL50803_12057	A8BC51	A8BFK8	Coiled-coil protein.	Spindle pole body component.	0.835
GL50803_11867	GL50803_15218	A8BC51	A8B754	Coiled-coil protein.	WD-40 repeat protein.	0.886
GL50803_11867	GL50803_16202	A8BC51	A8BQI0	Coiled-coil protein.	Axoneme central apparatus protein.	0.867
GL50803_11867	GL50803_16279	A8BC51	A8BEQ0	Coiled-coil protein.	Kinase, NEK.	0.822
GL50803_11867	GL50803_16973	A8BC51	A8B817	Coiled-coil protein.	Uncharacterized protein.	0.826
GL50803_11867	GL50803_41512	A8BC51	A8BSY0	Coiled-coil protein.	Flagella associated protein.	0.912
GL50803_11867	GL50803_4689	A8BC51	D3KHV5	Coiled-coil protein.	Uncharacterized protein.	0.826
GL50803_11867	GL50803_4692	A8BC51	A8BRD3	Coiled-coil protein.	Uncharacterized protein.	0.826
GL50803_11867	GL50803_92498	A8BC51	A8BVL0	Coiled-coil protein.	Kinase, NEK.	0.643