(19 nodes) Small-subunit processome, and Formation of the ternary complex, and subsequently, the 43S complex network (Giardia lamblia ATCC 50803)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GL50803_5845	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (174 aa)
	GL50803_15513	WD-repeat protein BING4. (562 aa)
	GL50803_14620	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (248 aa)
	GL50803_10459	CGI-35 protein, putative. (190 aa)
	GL50803_103285	Protein BAP28. (2381 aa)
	GL50803_11319	U3 small nucleolar ribonucleoprotein protein IMP3, putative. (184 aa)
	GL50803_9611	Fcf2 domain-containing protein. (213 aa)
	GL50803_5359	Nucleolar protein NOP5. (613 aa)
	GL50803_13616	Glycine-rich protein. (484 aa)
	GL50803_16652	Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (154 aa)
	GL50803_15026	Src-associated protein-like protein. (593 aa)
	GL50803_4257	CBF domain-containing protein. (792 aa)
	GL50803_8892	Uncharacterized protein. (468 aa)
	GL50803_12598	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (328 aa)
	GL50803_14641	Transducin. (545 aa)
	GL50803_8361	SOF1 protein. (516 aa)
	GL50803_16264	WD-40 repeat protein. (1041 aa)
	GL50803_16265	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (248 aa)
	GL50803_14329	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (190 aa)

Your Current Organism:

Giardia lamblia ATCC 50803

NCBI taxonomy Id: 184922
Other names: G. lamblia ATCC 50803, Giardia intestinalis ATCC 50803

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GL50803_103285	GL50803_10459	A8B762	A8B755	Protein BAP28.	CGI-35 protein, putative.	0.999
GL50803_103285	GL50803_11319	A8B762	A8B8I9	Protein BAP28.	U3 small nucleolar ribonucleoprotein protein IMP3, putative.	0.999
GL50803_103285	GL50803_12598	A8B762	A8BM32	Protein BAP28.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.999
GL50803_103285	GL50803_13616	A8B762	A8BDS9	Protein BAP28.	Glycine-rich protein.	0.999
GL50803_103285	GL50803_14329	A8B762	A8BT38	Protein BAP28.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.999
GL50803_103285	GL50803_14620	A8B762	A8B6L8	Protein BAP28.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.999
GL50803_103285	GL50803_14641	A8B762	A8BMY9	Protein BAP28.	Transducin.	0.999
GL50803_103285	GL50803_15026	A8B762	A8BE73	Protein BAP28.	Src-associated protein-like protein.	0.999
GL50803_103285	GL50803_15513	A8B762	A8B2R9	Protein BAP28.	WD-repeat protein BING4.	0.999
GL50803_103285	GL50803_16264	A8B762	A8BS78	Protein BAP28.	WD-40 repeat protein.	0.999
GL50803_103285	GL50803_16265	A8B762	A8BS79	Protein BAP28.	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999
GL50803_103285	GL50803_16652	A8B762	A8BE02	Protein BAP28.	Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	0.999
GL50803_103285	GL50803_4257	A8B762	A8BHA5	Protein BAP28.	CBF domain-containing protein.	0.999
GL50803_103285	GL50803_5359	A8B762	A8BBN0	Protein BAP28.	Nucleolar protein NOP5.	0.999
GL50803_103285	GL50803_5845	A8B762	A8B252	Protein BAP28.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.999
GL50803_103285	GL50803_8361	A8B762	A8BRU6	Protein BAP28.	SOF1 protein.	0.999
GL50803_103285	GL50803_8892	A8B762	A8BJW7	Protein BAP28.	Uncharacterized protein.	0.999
GL50803_103285	GL50803_9611	A8B762	A8BAS5	Protein BAP28.	Fcf2 domain-containing protein.	0.999
GL50803_10459	GL50803_103285	A8B755	A8B762	CGI-35 protein, putative.	Protein BAP28.	0.999
GL50803_10459	GL50803_11319	A8B755	A8B8I9	CGI-35 protein, putative.	U3 small nucleolar ribonucleoprotein protein IMP3, putative.	0.999