22 items (Giardia lamblia ATCC 50803) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	GL50803_6054	RNA binding putative. (188 aa)
	GL50803_113971	Transducin. (481 aa)
	GL50803_16948	Nucleolar protein NOP2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (502 aa)
	GL50803_11755	Uncharacterized protein. (260 aa)
	GL50803_16602	Uncharacterized protein. (782 aa)
	GL50803_16498	Nucleolar GTPase. (541 aa)
	GL50803_10810	Uncharacterized protein. (279 aa)
	GL50803_6835	Brix domain containing protein. (332 aa)
	GL50803_16887	ATP-dependent RNA helicase HAS1, putative; Belongs to the DEAD box helicase family. (547 aa)
	GL50803_101594	CCAAT-box-binding transcription factor. (1059 aa)
	GL50803_17112	U3 small nucleolar ribonucleoprotein protein IMP4, putative. (366 aa)
	GL50803_3589	Ribosome biogenesis protein Brix. (348 aa)
	GL50803_10193	WD-repeat membrane protein, putative. (960 aa)
	GL50803_14174	Glutamate-rich WD-repeat protein. (531 aa)
	GL50803_16371	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (676 aa)
	GL50803_13412	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (251 aa)
	GL50803_16299	Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (863 aa)
	GL50803_16658	Uncharacterized protein. (542 aa)
	GL50803_6177	Ribosome subunit biogenesis protein NIP7. (231 aa)
	GL50803_92031	RNA binding protein, putative. (1025 aa)
	GL50803_5661	Protein MAK16 homolog; Belongs to the MAK16 family. (236 aa)
	GL50803_16313	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (581 aa)

Your Current Organism:

Giardia lamblia ATCC 50803

NCBI taxonomy Id: 184922
Other names: G. lamblia ATCC 50803, Giardia intestinalis ATCC 50803

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GL50803_101594	GL50803_10193	A8BGN3	A8BK93	CCAAT-box-binding transcription factor.	WD-repeat membrane protein, putative.	0.994
GL50803_101594	GL50803_10810	A8BGN3	A8BB01	CCAAT-box-binding transcription factor.	Uncharacterized protein.	0.982
GL50803_101594	GL50803_113971	A8BGN3	A8B4P5	CCAAT-box-binding transcription factor.	Transducin.	0.852
GL50803_101594	GL50803_11755	A8BGN3	A8B8T6	CCAAT-box-binding transcription factor.	Uncharacterized protein.	0.619
GL50803_101594	GL50803_13412	A8BGN3	A8BN05	CCAAT-box-binding transcription factor.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.795
GL50803_101594	GL50803_14174	A8BGN3	A8BLW2	CCAAT-box-binding transcription factor.	Glutamate-rich WD-repeat protein.	0.982
GL50803_101594	GL50803_16299	A8BGN3	A8BNX5	CCAAT-box-binding transcription factor.	Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.	0.999
GL50803_101594	GL50803_16313	A8BGN3	A8BZA6	CCAAT-box-binding transcription factor.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.981
GL50803_101594	GL50803_16371	A8BGN3	A8BMM8	CCAAT-box-binding transcription factor.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.999
GL50803_101594	GL50803_16498	A8BGN3	A8BA45	CCAAT-box-binding transcription factor.	Nucleolar GTPase.	0.999
GL50803_101594	GL50803_16602	A8BGN3	A8B942	CCAAT-box-binding transcription factor.	Uncharacterized protein.	0.999
GL50803_101594	GL50803_16658	A8BGN3	A8BQ33	CCAAT-box-binding transcription factor.	Uncharacterized protein.	0.943
GL50803_101594	GL50803_16887	A8BGN3	A8BG90	CCAAT-box-binding transcription factor.	ATP-dependent RNA helicase HAS1, putative; Belongs to the DEAD box helicase family.	0.867
GL50803_101594	GL50803_16948	A8BGN3	A8B636	CCAAT-box-binding transcription factor.	Nucleolar protein NOP2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.976
GL50803_101594	GL50803_17112	A8BGN3	A8BJ58	CCAAT-box-binding transcription factor.	U3 small nucleolar ribonucleoprotein protein IMP4, putative.	0.856
GL50803_101594	GL50803_3589	A8BGN3	A8BJN9	CCAAT-box-binding transcription factor.	Ribosome biogenesis protein Brix.	0.969
GL50803_101594	GL50803_5661	A8BGN3	A8BXD1	CCAAT-box-binding transcription factor.	Protein MAK16 homolog; Belongs to the MAK16 family.	0.802
GL50803_101594	GL50803_6054	A8BGN3	A8B3D2	CCAAT-box-binding transcription factor.	RNA binding putative.	0.949
GL50803_101594	GL50803_6177	A8BGN3	A8BRN4	CCAAT-box-binding transcription factor.	Ribosome subunit biogenesis protein NIP7.	0.799
GL50803_101594	GL50803_6835	A8BGN3	A8BD66	CCAAT-box-binding transcription factor.	Brix domain containing protein.	0.995