(5 nodes) Preribosome, large subunit precursor network (Giardia lamblia ATCC 50803)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GL50803_17112	U3 small nucleolar ribonucleoprotein protein IMP4, putative. (366 aa)
	GL50803_16371	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (676 aa)
	GL50803_16658	Uncharacterized protein. (542 aa)
	GL50803_5661	Protein MAK16 homolog; Belongs to the MAK16 family. (236 aa)
	GL50803_16313	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (581 aa)

Your Current Organism:

Giardia lamblia ATCC 50803

NCBI taxonomy Id: 184922
Other names: G. lamblia ATCC 50803, Giardia intestinalis ATCC 50803

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GL50803_16313	GL50803_16371	A8BZA6	A8BMM8	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.999
GL50803_16313	GL50803_16658	A8BZA6	A8BQ33	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	Uncharacterized protein.	0.999
GL50803_16313	GL50803_17112	A8BZA6	A8BJ58	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	U3 small nucleolar ribonucleoprotein protein IMP4, putative.	0.999
GL50803_16313	GL50803_5661	A8BZA6	A8BXD1	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	Protein MAK16 homolog; Belongs to the MAK16 family.	0.995
GL50803_16371	GL50803_16313	A8BMM8	A8BZA6	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.999
GL50803_16371	GL50803_16658	A8BMM8	A8BQ33	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	Uncharacterized protein.	0.999
GL50803_16371	GL50803_17112	A8BMM8	A8BJ58	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	U3 small nucleolar ribonucleoprotein protein IMP4, putative.	0.999
GL50803_16371	GL50803_5661	A8BMM8	A8BXD1	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	Protein MAK16 homolog; Belongs to the MAK16 family.	0.999
GL50803_16658	GL50803_16313	A8BQ33	A8BZA6	Uncharacterized protein.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.999
GL50803_16658	GL50803_16371	A8BQ33	A8BMM8	Uncharacterized protein.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.999
GL50803_16658	GL50803_17112	A8BQ33	A8BJ58	Uncharacterized protein.	U3 small nucleolar ribonucleoprotein protein IMP4, putative.	0.999
GL50803_16658	GL50803_5661	A8BQ33	A8BXD1	Uncharacterized protein.	Protein MAK16 homolog; Belongs to the MAK16 family.	0.999
GL50803_17112	GL50803_16313	A8BJ58	A8BZA6	U3 small nucleolar ribonucleoprotein protein IMP4, putative.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.999
GL50803_17112	GL50803_16371	A8BJ58	A8BMM8	U3 small nucleolar ribonucleoprotein protein IMP4, putative.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.999
GL50803_17112	GL50803_16658	A8BJ58	A8BQ33	U3 small nucleolar ribonucleoprotein protein IMP4, putative.	Uncharacterized protein.	0.999
GL50803_17112	GL50803_5661	A8BJ58	A8BXD1	U3 small nucleolar ribonucleoprotein protein IMP4, putative.	Protein MAK16 homolog; Belongs to the MAK16 family.	0.999
GL50803_5661	GL50803_16313	A8BXD1	A8BZA6	Protein MAK16 homolog; Belongs to the MAK16 family.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.995
GL50803_5661	GL50803_16371	A8BXD1	A8BMM8	Protein MAK16 homolog; Belongs to the MAK16 family.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.999
GL50803_5661	GL50803_16658	A8BXD1	A8BQ33	Protein MAK16 homolog; Belongs to the MAK16 family.	Uncharacterized protein.	0.999
GL50803_5661	GL50803_17112	A8BXD1	A8BJ58	Protein MAK16 homolog; Belongs to the MAK16 family.	U3 small nucleolar ribonucleoprotein protein IMP4, putative.	0.999