(10 nodes) Mixed, incl. Nucleotidyltransferase Trf4-like, and Gene silencing by RNA network (Giardia lamblia ATCC 50803)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GL50803_16180	Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated. (419 aa)
	GL50803_95880	Uncharacterized protein. (403 aa)
	GL50803_16285	Topoisomerase I-related protein. (520 aa)
	GL50803_97820	VSP, putative. (102 aa)
	GL50803_103887	Endoribonuclease Dicer-like; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. (754 aa)
	GL50803_36493	VSP. (194 aa)
	GL50803_16863	Caffeine-induced death protein 1-like protein. (677 aa)
	GL50803_11912	Uncharacterized protein. (2013 aa)
	GL50803_102515	RNA-directed RNA polymerase, putative. (2001 aa)
	GL50803_137614	VSP AS12. (547 aa)

Your Current Organism:

Giardia lamblia ATCC 50803

NCBI taxonomy Id: 184922
Other names: G. lamblia ATCC 50803, Giardia intestinalis ATCC 50803

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GL50803_102515	GL50803_103887	E2RTV4	A8BQJ3	RNA-directed RNA polymerase, putative.	Endoribonuclease Dicer-like; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs.	0.964
GL50803_102515	GL50803_11912	E2RTV4	D3KG10	RNA-directed RNA polymerase, putative.	Uncharacterized protein.	0.640
GL50803_102515	GL50803_16180	E2RTV4	A8BA82	RNA-directed RNA polymerase, putative.	Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated.	0.677
GL50803_103887	GL50803_102515	A8BQJ3	E2RTV4	Endoribonuclease Dicer-like; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs.	RNA-directed RNA polymerase, putative.	0.964
GL50803_103887	GL50803_137614	A8BQJ3	E2RU01	Endoribonuclease Dicer-like; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs.	VSP AS12.	0.822
GL50803_103887	GL50803_16180	A8BQJ3	A8BA82	Endoribonuclease Dicer-like; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs.	Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated.	0.838
GL50803_103887	GL50803_16863	A8BQJ3	A8BVU1	Endoribonuclease Dicer-like; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs.	Caffeine-induced death protein 1-like protein.	0.640
GL50803_103887	GL50803_36493	A8BQJ3	A8BVQ2	Endoribonuclease Dicer-like; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs.	VSP.	0.826
GL50803_103887	GL50803_97820	A8BQJ3	A8BPN5	Endoribonuclease Dicer-like; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs.	VSP, putative.	0.822
GL50803_11912	GL50803_102515	D3KG10	E2RTV4	Uncharacterized protein.	RNA-directed RNA polymerase, putative.	0.640
GL50803_137614	GL50803_103887	E2RU01	A8BQJ3	VSP AS12.	Endoribonuclease Dicer-like; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs.	0.822
GL50803_16180	GL50803_102515	A8BA82	E2RTV4	Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated.	RNA-directed RNA polymerase, putative.	0.677
GL50803_16180	GL50803_103887	A8BA82	A8BQJ3	Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated.	Endoribonuclease Dicer-like; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs.	0.838
GL50803_16285	GL50803_95880	A8BLC1	A8BHT0	Topoisomerase I-related protein.	Uncharacterized protein.	0.540
GL50803_16863	GL50803_103887	A8BVU1	A8BQJ3	Caffeine-induced death protein 1-like protein.	Endoribonuclease Dicer-like; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs.	0.640
GL50803_36493	GL50803_103887	A8BVQ2	A8BQJ3	VSP.	Endoribonuclease Dicer-like; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs.	0.826
GL50803_95880	GL50803_16285	A8BHT0	A8BLC1	Uncharacterized protein.	Topoisomerase I-related protein.	0.540
GL50803_97820	GL50803_103887	A8BPN5	A8BQJ3	VSP, putative.	Endoribonuclease Dicer-like; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs.	0.822