STRINGSTRING
GL50803_9611 GL50803_9611 GL50803_5786 GL50803_5786 GL50803_15513 GL50803_15513 GL50803_102722 GL50803_102722 GL50803_6054 GL50803_6054 GL50803_10297 GL50803_10297 GL50803_14089 GL50803_14089 GL50803_113971 GL50803_113971 GL50803_89887 GL50803_89887 GL50803_8782 GL50803_8782 FEN1 FEN1 GL50803_8243 GL50803_8243 GL50803_22802 GL50803_22802 GL50803_10459 GL50803_10459 GL50803_103285 GL50803_103285 GL50803_10840 GL50803_10840 GL50803_14869 GL50803_14869 GL50803_23496 GL50803_23496 GL50803_29436 GL50803_29436 GL50803_11319 GL50803_11319 GL50803_11755 GL50803_11755 EIF6 EIF6 GL50803_16602 GL50803_16602 GL50803_10055 GL50803_10055 GL50803_15581 GL50803_15581 GL50803_97219 GL50803_97219 GL50803_16498 GL50803_16498 GL50803_3985 GL50803_3985 GL50803_13667 GL50803_13667 GL50803_9274 GL50803_9274 GL50803_14413 GL50803_14413 GL50803_2750 GL50803_2750 GL50803_10810 GL50803_10810 GL50803_16882 GL50803_16882 GL50803_8518 GL50803_8518 GL50803_5359 GL50803_5359 GL50803_16993 GL50803_16993 GL50803_8916 GL50803_8916 GL50803_17166 GL50803_17166 GL50803_13926 GL50803_13926 GL50803_16173 GL50803_16173 GL50803_13791 GL50803_13791 GL50803_6835 GL50803_6835 GL50803_1894 GL50803_1894 GL50803_16042 GL50803_16042 GL50803_13616 GL50803_13616 GL50803_15026 GL50803_15026 GL50803_16718 GL50803_16718 GL50803_6211 GL50803_6211 GL50803_14098 GL50803_14098 GL50803_13220 GL50803_13220 GL50803_137619 GL50803_137619 GL50803_2400 GL50803_2400 GL50803_8794 GL50803_8794 GL50803_4257 GL50803_4257 GL50803_95898 GL50803_95898 GL50803_95880 GL50803_95880 GL50803_137690 GL50803_137690 GL50803_17112 GL50803_17112 GL50803_2825 GL50803_2825 GL50803_3589 GL50803_3589 GL50803_8892 GL50803_8892 GL50803_10569 GL50803_10569 GL50803_10577 GL50803_10577 GL50803_10193 GL50803_10193 GL50803_3993 GL50803_3993 GL50803_16285 GL50803_16285 GL50803_3042 GL50803_3042 GL50803_17387 GL50803_17387 GL50803_14174 GL50803_14174 GL50803_15487 GL50803_15487 GL50803_12598 GL50803_12598 GL50803_11287 GL50803_11287 GL50803_16371 GL50803_16371 GL50803_96537 GL50803_96537 GL50803_14641 GL50803_14641 GL50803_13412 GL50803_13412 GL50803_16299 GL50803_16299 GL50803_90950 GL50803_90950 GL50803_5294 GL50803_5294 GL50803_6177 GL50803_6177 GL50803_8361 GL50803_8361 GL50803_16264 GL50803_16264 GL50803_14702 GL50803_14702 GL50803_21512 GL50803_21512 GL50803_14327 GL50803_14327 GL50803_113655 GL50803_113655 GL50803_40521 GL50803_40521 GL50803_15555 GL50803_15555 GL50803_5661 GL50803_5661 GL50803_11638 GL50803_11638 GL50803_14277 GL50803_14277 GL50803_8627 GL50803_8627 GL50803_11984 GL50803_11984 GL50803_16313 GL50803_16313 GL50803_14208 GL50803_14208 GL50803_7517 GL50803_7517 GL50803_3294 GL50803_3294 GL50803_15955 GL50803_15955 GL50803_14451 GL50803_14451 GL50803_8035 GL50803_8035 GL50803_15144 GL50803_15144 GL50803_137609 GL50803_137609 GL50803_8157 GL50803_8157
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GL50803_9611Fcf2 domain-containing protein. (213 aa)
GL50803_5786Ribosome biogenesis protein NEP1, putative. (231 aa)
GL50803_15513WD-repeat protein BING4. (562 aa)
GL50803_102722Ribosome biogenesis protein BMS1. (1293 aa)
GL50803_6054RNA binding putative. (188 aa)
GL50803_10297U3 small nucleolar RNA interacting protein, putative. (449 aa)
GL50803_14089WD_REPEATS_REGION domain-containing protein. (506 aa)
GL50803_113971Transducin. (481 aa)
GL50803_89887Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (737 aa)
GL50803_8782Protein required for cell viability. (569 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (361 aa)
GL50803_8243Uncharacterized protein. (674 aa)
GL50803_22802Shwachman-Bodian-Diamond syndrome protein-like protein. (251 aa)
GL50803_10459CGI-35 protein, putative. (190 aa)
GL50803_103285Protein BAP28. (2381 aa)
GL50803_10840DNA-directed RNA polymerases I and III 16 kDa polypeptide. (101 aa)
GL50803_14869Ribosomal protein L24. (189 aa)
GL50803_23496DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (2142 aa)
GL50803_29436DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1235 aa)
GL50803_11319U3 small nucleolar ribonucleoprotein protein IMP3, putative. (184 aa)
GL50803_11755Uncharacterized protein. (260 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (246 aa)
GL50803_16602Uncharacterized protein. (782 aa)
GL50803_10055DNA-directed RNA polymerase subunit D. (350 aa)
GL50803_15581WD_REPEATS_REGION domain-containing protein. (342 aa)
GL50803_97219Fibrillarin-like pre-rRNA processing protein Narcisi et al. (327 aa)
GL50803_16498Nucleolar GTPase. (541 aa)
GL50803_3985tRNA/rRNA cytosine-C5-methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (458 aa)
GL50803_13667Notchless. (512 aa)
GL50803_9274U3 small nucleolar ribonucleoprotein protein MPP10, putative. (374 aa)
GL50803_14413DNA-directed RNA polymerase RPB10. (122 aa)
GL50803_2750Uncharacterized protein. (182 aa)
GL50803_10810Uncharacterized protein. (279 aa)
GL50803_16882Bystin. (479 aa)
GL50803_8518DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (103 aa)
GL50803_5359Nucleolar protein NOP5. (613 aa)
GL50803_16993FtsJ cell division protein, putative. (1084 aa)
GL50803_8916Signal recognition particle 68kDa. (607 aa)
GL50803_17166Uncharacterized protein. (731 aa)
GL50803_13926Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (171 aa)
GL50803_16173U3 small nucleolar ribonucleoprotein protein IMP4, putative. (283 aa)
GL50803_13791ATP-dependent RNA helicase. (625 aa)
GL50803_6835Brix domain containing protein. (332 aa)
GL50803_1894U3 small nucleolar RNA-associated protein 11, putative. (227 aa)
GL50803_16042ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (632 aa)
GL50803_13616Glycine-rich protein. (484 aa)
GL50803_15026Src-associated protein-like protein. (593 aa)
GL50803_16718Partner of Nob1. (201 aa)
GL50803_6211Protein required for cell viability. (746 aa)
GL50803_14098ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (771 aa)
GL50803_13220ATP-dependent RNA helicase. (756 aa)
GL50803_137619DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (105 aa)
GL50803_2400Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. (198 aa)
GL50803_8794H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (183 aa)
GL50803_4257CBF domain-containing protein. (792 aa)
GL50803_95898ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (560 aa)
GL50803_95880Uncharacterized protein. (403 aa)
GL50803_137690Helicase C-terminal domain-containing protein. (263 aa)
GL50803_17112U3 small nucleolar ribonucleoprotein protein IMP4, putative. (366 aa)
GL50803_2825Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (122 aa)
GL50803_3589Ribosome biogenesis protein Brix. (348 aa)
GL50803_8892Uncharacterized protein. (468 aa)
GL50803_10569Kri1_C domain-containing protein. (505 aa)
GL50803_10577Nucleolar protein NOP5. (498 aa)
GL50803_10193WD-repeat membrane protein, putative. (960 aa)
GL50803_3993Polyadenylate-binding protein, putative. (663 aa)
GL50803_16285Topoisomerase I-related protein. (520 aa)
GL50803_3042Hybrid cluster protein lateral transfer candidate. (568 aa)
GL50803_17387ATP-dependent RNA helicase DHR1, putative. (1478 aa)
GL50803_14174Glutamate-rich WD-repeat protein. (531 aa)
GL50803_15487WD-40 repeat protein. (960 aa)
GL50803_12598KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (328 aa)
GL50803_11287Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (122 aa)
GL50803_16371Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (676 aa)
GL50803_96537ATP-dependent RNA helicase. (616 aa)
GL50803_14641Transducin. (545 aa)
GL50803_13412Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (251 aa)
GL50803_16299Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (863 aa)
GL50803_90950ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (900 aa)
GL50803_5294Protein F10G7.1. (826 aa)
GL50803_6177Ribosome subunit biogenesis protein NIP7. (231 aa)
GL50803_8361SOF1 protein. (516 aa)
GL50803_16264WD-40 repeat protein. (1041 aa)
GL50803_14702rRNA biogenesis protein RRP5. (1842 aa)
GL50803_21512S-adenosylmethionine-dependent methyltransferase, putative. (291 aa)
GL50803_14327Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (304 aa)
GL50803_113655Uncharacterized protein. (561 aa)
GL50803_40521SBDS domain-containing protein. (292 aa)
GL50803_15555ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (730 aa)
GL50803_5661Protein MAK16 homolog; Belongs to the MAK16 family. (236 aa)
GL50803_11638Topoisomerase I-related protein. (512 aa)
GL50803_14277N-acetyltransferase-like protein. (1025 aa)
GL50803_8627Uncharacterized protein. (257 aa)
GL50803_11984Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (176 aa)
GL50803_16313Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (581 aa)
GL50803_14208XPGN domain-containing protein. (832 aa)
GL50803_7517CLP1_P domain-containing protein. (607 aa)
GL50803_3294Uncharacterized protein. (197 aa)
GL50803_15955DNA-directed RNA polymerase II RPB6. (104 aa)
GL50803_14451ATP-dependent RNA helicase. (554 aa)
GL50803_8035Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (755 aa)
GL50803_15144DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
GL50803_137609RNA polymerase II subunit Rpb5a. (229 aa)
GL50803_8157RNA polymerase II subunit Rpb5b. (201 aa)
Your Current Organism:
Giardia lamblia ATCC 50803
NCBI taxonomy Id: 184922
Other names: G. lamblia ATCC 50803, Giardia intestinalis ATCC 50803
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