(8 nodes) ER to Golgi transport vesicle membrane network (Giardia lamblia ATCC 50803)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GL50803_137698	Sec13; Belongs to the WD repeat SEC13 family. (294 aa)
	GL50803_7569	GTP-binding protein Sar1; Belongs to the small GTPase superfamily. SAR1 family. (191 aa)
	GL50803_112103	Arginine deiminase. (580 aa)
	GL50803_16520	Sec24-like. (1177 aa)
	GL50803_17065	Sec24. (980 aa)
	GL50803_9376	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (861 aa)
	GL50803_2562	Sec31. (1024 aa)
	GL50803_17164	Sec24-like. (971 aa)

Your Current Organism:

Giardia lamblia ATCC 50803

NCBI taxonomy Id: 184922
Other names: G. lamblia ATCC 50803, Giardia intestinalis ATCC 50803

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GL50803_112103	GL50803_137698	E2RU36	A8B9T4	Arginine deiminase.	Sec13; Belongs to the WD repeat SEC13 family.	0.628
GL50803_112103	GL50803_16520	E2RU36	A8BRX4	Arginine deiminase.	Sec24-like.	0.809
GL50803_112103	GL50803_17065	E2RU36	A8B855	Arginine deiminase.	Sec24.	0.607
GL50803_112103	GL50803_17164	E2RU36	A8BC70	Arginine deiminase.	Sec24-like.	0.607
GL50803_112103	GL50803_2562	E2RU36	A8BR71	Arginine deiminase.	Sec31.	0.501
GL50803_112103	GL50803_9376	E2RU36	A8B8F4	Arginine deiminase.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.830
GL50803_137698	GL50803_112103	A8B9T4	E2RU36	Sec13; Belongs to the WD repeat SEC13 family.	Arginine deiminase.	0.628
GL50803_137698	GL50803_16520	A8B9T4	A8BRX4	Sec13; Belongs to the WD repeat SEC13 family.	Sec24-like.	0.996
GL50803_137698	GL50803_17065	A8B9T4	A8B855	Sec13; Belongs to the WD repeat SEC13 family.	Sec24.	0.994
GL50803_137698	GL50803_17164	A8B9T4	A8BC70	Sec13; Belongs to the WD repeat SEC13 family.	Sec24-like.	0.968
GL50803_137698	GL50803_2562	A8B9T4	A8BR71	Sec13; Belongs to the WD repeat SEC13 family.	Sec31.	0.999
GL50803_137698	GL50803_7569	A8B9T4	A8B8P7	Sec13; Belongs to the WD repeat SEC13 family.	GTP-binding protein Sar1; Belongs to the small GTPase superfamily. SAR1 family.	0.965
GL50803_137698	GL50803_9376	A8B9T4	A8B8F4	Sec13; Belongs to the WD repeat SEC13 family.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.999
GL50803_16520	GL50803_112103	A8BRX4	E2RU36	Sec24-like.	Arginine deiminase.	0.809
GL50803_16520	GL50803_137698	A8BRX4	A8B9T4	Sec24-like.	Sec13; Belongs to the WD repeat SEC13 family.	0.996
GL50803_16520	GL50803_17065	A8BRX4	A8B855	Sec24-like.	Sec24.	0.958
GL50803_16520	GL50803_17164	A8BRX4	A8BC70	Sec24-like.	Sec24-like.	0.958
GL50803_16520	GL50803_2562	A8BRX4	A8BR71	Sec24-like.	Sec31.	0.980
GL50803_16520	GL50803_7569	A8BRX4	A8B8P7	Sec24-like.	GTP-binding protein Sar1; Belongs to the small GTPase superfamily. SAR1 family.	0.956
GL50803_16520	GL50803_9376	A8BRX4	A8B8F4	Sec24-like.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.999