(9 nodes) Nucleobase-containing compound transport network (Giardia lamblia ATCC 50803)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GL50803_8038	Peptidase S59 domain-containing protein. (421 aa)
	GL50803_96818	Uncharacterized protein. (487 aa)
	GL50803_6138	Peptidase S59 domain-containing protein. (162 aa)
	GL50803_16376	ATP-dependent RNA helicase p47, putative. (516 aa)
	GL50803_3598	RRM Nup35-type domain-containing protein. (186 aa)
	GL50803_137698	Sec13; Belongs to the WD repeat SEC13 family. (294 aa)
	GL50803_5910	Helicase-related protein. (595 aa)
	GL50803_112408	Nucleoporin_N domain-containing protein. (1853 aa)
	GL50803_15483	Uncharacterized protein. (387 aa)

Your Current Organism:

Giardia lamblia ATCC 50803

NCBI taxonomy Id: 184922
Other names: G. lamblia ATCC 50803, Giardia intestinalis ATCC 50803

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GL50803_112408	GL50803_137698	A8B474	A8B9T4	Nucleoporin_N domain-containing protein.	Sec13; Belongs to the WD repeat SEC13 family.	0.997
GL50803_112408	GL50803_3598	A8B474	A8BL17	Nucleoporin_N domain-containing protein.	RRM Nup35-type domain-containing protein.	0.999
GL50803_112408	GL50803_6138	A8B474	A8BRG2	Nucleoporin_N domain-containing protein.	Peptidase S59 domain-containing protein.	0.945
GL50803_112408	GL50803_8038	A8B474	A8BZA0	Nucleoporin_N domain-containing protein.	Peptidase S59 domain-containing protein.	0.945
GL50803_137698	GL50803_112408	A8B9T4	A8B474	Sec13; Belongs to the WD repeat SEC13 family.	Nucleoporin_N domain-containing protein.	0.997
GL50803_137698	GL50803_16376	A8B9T4	A8BS28	Sec13; Belongs to the WD repeat SEC13 family.	ATP-dependent RNA helicase p47, putative.	0.406
GL50803_137698	GL50803_3598	A8B9T4	A8BL17	Sec13; Belongs to the WD repeat SEC13 family.	RRM Nup35-type domain-containing protein.	0.932
GL50803_137698	GL50803_6138	A8B9T4	A8BRG2	Sec13; Belongs to the WD repeat SEC13 family.	Peptidase S59 domain-containing protein.	0.940
GL50803_137698	GL50803_8038	A8B9T4	A8BZA0	Sec13; Belongs to the WD repeat SEC13 family.	Peptidase S59 domain-containing protein.	0.940
GL50803_16376	GL50803_137698	A8BS28	A8B9T4	ATP-dependent RNA helicase p47, putative.	Sec13; Belongs to the WD repeat SEC13 family.	0.406
GL50803_16376	GL50803_3598	A8BS28	A8BL17	ATP-dependent RNA helicase p47, putative.	RRM Nup35-type domain-containing protein.	0.403
GL50803_3598	GL50803_112408	A8BL17	A8B474	RRM Nup35-type domain-containing protein.	Nucleoporin_N domain-containing protein.	0.999
GL50803_3598	GL50803_137698	A8BL17	A8B9T4	RRM Nup35-type domain-containing protein.	Sec13; Belongs to the WD repeat SEC13 family.	0.932
GL50803_3598	GL50803_16376	A8BL17	A8BS28	RRM Nup35-type domain-containing protein.	ATP-dependent RNA helicase p47, putative.	0.403
GL50803_3598	GL50803_6138	A8BL17	A8BRG2	RRM Nup35-type domain-containing protein.	Peptidase S59 domain-containing protein.	0.833
GL50803_3598	GL50803_8038	A8BL17	A8BZA0	RRM Nup35-type domain-containing protein.	Peptidase S59 domain-containing protein.	0.833
GL50803_6138	GL50803_112408	A8BRG2	A8B474	Peptidase S59 domain-containing protein.	Nucleoporin_N domain-containing protein.	0.945
GL50803_6138	GL50803_137698	A8BRG2	A8B9T4	Peptidase S59 domain-containing protein.	Sec13; Belongs to the WD repeat SEC13 family.	0.940
GL50803_6138	GL50803_3598	A8BRG2	A8BL17	Peptidase S59 domain-containing protein.	RRM Nup35-type domain-containing protein.	0.833
GL50803_8038	GL50803_112408	A8BZA0	A8B474	Peptidase S59 domain-containing protein.	Nucleoporin_N domain-containing protein.	0.945