(8 nodes) Protein deubiquitination network (Giardia lamblia ATCC 50803)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GL50803_5533	DUB-1. (604 aa)
	GL50803_16090	Ubiquitin carboxyl-terminal hydrolase 4; Belongs to the peptidase C19 family. (439 aa)
	GL50803_102710	Ubiquitinyl hydrolase 1. (813 aa)
	GL50803_7349	Ubiquitin. (587 aa)
	GL50803_6317	Uncharacterized protein. (1345 aa)
	GL50803_16823	Non ATPase subunit MPR1 of 26S proteasome. (334 aa)
	GL50803_14460	Ubiquitin carboxyl-terminal hydrolase. (819 aa)
	GL50803_88556	OTU domain-containing protein. (328 aa)

Your Current Organism:

Giardia lamblia ATCC 50803

NCBI taxonomy Id: 184922
Other names: G. lamblia ATCC 50803, Giardia intestinalis ATCC 50803

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GL50803_102710	GL50803_16823	A8B354	A8BFY1	Ubiquitinyl hydrolase 1.	Non ATPase subunit MPR1 of 26S proteasome.	0.687
GL50803_102710	GL50803_6317	A8B354	A8BKG1	Ubiquitinyl hydrolase 1.	Uncharacterized protein.	0.633
GL50803_102710	GL50803_88556	A8B354	A8B7X7	Ubiquitinyl hydrolase 1.	OTU domain-containing protein.	0.686
GL50803_16823	GL50803_102710	A8BFY1	A8B354	Non ATPase subunit MPR1 of 26S proteasome.	Ubiquitinyl hydrolase 1.	0.687
GL50803_16823	GL50803_88556	A8BFY1	A8B7X7	Non ATPase subunit MPR1 of 26S proteasome.	OTU domain-containing protein.	0.494
GL50803_6317	GL50803_102710	A8BKG1	A8B354	Uncharacterized protein.	Ubiquitinyl hydrolase 1.	0.633
GL50803_6317	GL50803_88556	A8BKG1	A8B7X7	Uncharacterized protein.	OTU domain-containing protein.	0.483
GL50803_7349	GL50803_88556	A8B929	A8B7X7	Ubiquitin.	OTU domain-containing protein.	0.826
GL50803_88556	GL50803_102710	A8B7X7	A8B354	OTU domain-containing protein.	Ubiquitinyl hydrolase 1.	0.686
GL50803_88556	GL50803_16823	A8B7X7	A8BFY1	OTU domain-containing protein.	Non ATPase subunit MPR1 of 26S proteasome.	0.494
GL50803_88556	GL50803_6317	A8B7X7	A8BKG1	OTU domain-containing protein.	Uncharacterized protein.	0.483
GL50803_88556	GL50803_7349	A8B7X7	A8B929	OTU domain-containing protein.	Ubiquitin.	0.826