(10 nodes) Fatty acid metabolism network (Giardia lamblia ATCC 50803)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GL50803_113892	Long chain fatty acid CoA ligase, putative. (758 aa)
	GL50803_14626	Oxidoreductase, short chain dehydrogenase/reductase family. (318 aa)
	GL50803_30476	Long chain fatty acid CoA ligase 4. (804 aa)
	GL50803_3287	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (411 aa)
	GL50803_8468	Uncharacterized protein. (292 aa)
	GL50803_7512	Protein tyrosine phosphatase-like protein. (198 aa)
	GL50803_15063	Long chain fatty acid CoA ligase 5. (693 aa)
	GL50803_9062	Long chain fatty acid CoA ligase 5. (853 aa)
	GL50803_88581	Synaptic glycoprotein SC2. (345 aa)
	GL50803_21118	Long chain fatty acid CoA ligase 5. (765 aa)

Your Current Organism:

Giardia lamblia ATCC 50803

NCBI taxonomy Id: 184922
Other names: G. lamblia ATCC 50803, Giardia intestinalis ATCC 50803

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GL50803_113892	GL50803_15063	A8B690	A8BL55	Long chain fatty acid CoA ligase, putative.	Long chain fatty acid CoA ligase 5.	0.683
GL50803_113892	GL50803_21118	A8B690	A8BT18	Long chain fatty acid CoA ligase, putative.	Long chain fatty acid CoA ligase 5.	0.605
GL50803_113892	GL50803_30476	A8B690	A8B9M9	Long chain fatty acid CoA ligase, putative.	Long chain fatty acid CoA ligase 4.	0.674
GL50803_113892	GL50803_9062	A8B690	A8BND4	Long chain fatty acid CoA ligase, putative.	Long chain fatty acid CoA ligase 5.	0.673
GL50803_14626	GL50803_7512	A8B6D0	A8BKZ7	Oxidoreductase, short chain dehydrogenase/reductase family.	Protein tyrosine phosphatase-like protein.	0.978
GL50803_14626	GL50803_8468	A8B6D0	A8BFS1	Oxidoreductase, short chain dehydrogenase/reductase family.	Uncharacterized protein.	0.914
GL50803_14626	GL50803_88581	A8B6D0	A8BNY7	Oxidoreductase, short chain dehydrogenase/reductase family.	Synaptic glycoprotein SC2.	0.979
GL50803_15063	GL50803_113892	A8BL55	A8B690	Long chain fatty acid CoA ligase 5.	Long chain fatty acid CoA ligase, putative.	0.683
GL50803_15063	GL50803_21118	A8BL55	A8BT18	Long chain fatty acid CoA ligase 5.	Long chain fatty acid CoA ligase 5.	0.682
GL50803_15063	GL50803_30476	A8BL55	A8B9M9	Long chain fatty acid CoA ligase 5.	Long chain fatty acid CoA ligase 4.	0.682
GL50803_15063	GL50803_9062	A8BL55	A8BND4	Long chain fatty acid CoA ligase 5.	Long chain fatty acid CoA ligase 5.	0.790
GL50803_21118	GL50803_113892	A8BT18	A8B690	Long chain fatty acid CoA ligase 5.	Long chain fatty acid CoA ligase, putative.	0.605
GL50803_21118	GL50803_15063	A8BT18	A8BL55	Long chain fatty acid CoA ligase 5.	Long chain fatty acid CoA ligase 5.	0.682
GL50803_21118	GL50803_30476	A8BT18	A8B9M9	Long chain fatty acid CoA ligase 5.	Long chain fatty acid CoA ligase 4.	0.673
GL50803_21118	GL50803_9062	A8BT18	A8BND4	Long chain fatty acid CoA ligase 5.	Long chain fatty acid CoA ligase 5.	0.675
GL50803_30476	GL50803_113892	A8B9M9	A8B690	Long chain fatty acid CoA ligase 4.	Long chain fatty acid CoA ligase, putative.	0.674
GL50803_30476	GL50803_15063	A8B9M9	A8BL55	Long chain fatty acid CoA ligase 4.	Long chain fatty acid CoA ligase 5.	0.682
GL50803_30476	GL50803_21118	A8B9M9	A8BT18	Long chain fatty acid CoA ligase 4.	Long chain fatty acid CoA ligase 5.	0.673
GL50803_30476	GL50803_9062	A8B9M9	A8BND4	Long chain fatty acid CoA ligase 4.	Long chain fatty acid CoA ligase 5.	0.615
GL50803_7512	GL50803_14626	A8BKZ7	A8B6D0	Protein tyrosine phosphatase-like protein.	Oxidoreductase, short chain dehydrogenase/reductase family.	0.978