(44 nodes) Mixed, incl. Bacterial extracellular solute-binding protein, and ABC-type maltose transporter activity network (Streptomyces sp. SAT1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANH90030.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (432 aa)
	ANH95209.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)
	ANH90031.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)
	A8713_08520	Isomerase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)
	ANH95313.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
	ANH91217.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
	ANH91403.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
	ANH95340.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
	ANH95341.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
	ANH91668.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
	ANH91669.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)
	ANH91670.1	Sugar-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (439 aa)
	ANH91778.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
	ANH91779.1	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)
	ANH91780.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (436 aa)
	ANH95399.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (480 aa)
	ANH95400.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (426 aa)
	ANH91803.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
	ANH92151.1	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (378 aa)
	ANH92523.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (418 aa)
	ANH92563.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (443 aa)
	ANH92564.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
	ANH92565.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
	ANH93357.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (427 aa)
	ANH93358.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)
	ANH95579.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)
	ANH94089.1	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
	ANH94090.1	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)
	ANH95666.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
	ANH94091.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (427 aa)
	ANH94092.1	Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glycosyltransferase family. (402 aa)
	A8713_26800	Translation elongation factor G; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (438 aa)
	ANH95694.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
	ANH94345.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
	ANH94373.1	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
	ANH94374.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (449 aa)
	ANH94375.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
	ANH94377.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
	ANH94379.1	Mycodextranase; Derived by automated computational analysis using gene prediction method: Protein Homology. (727 aa)
	ANH94661.1	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (419 aa)
	A8713_29180	Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)
	ANH94905.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
	ANH95773.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
	ANH94906.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (447 aa)

Your Current Organism:

Streptomyces sp. SAT1

NCBI taxonomy Id: 1849967
Other names: S. sp. SAT1

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A8713_08520	ANH90031.1	A8713_08520	A8713_01850	Isomerase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.627
A8713_08520	ANH91217.1	A8713_08520	A8713_08530	Isomerase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987
A8713_08520	ANH91403.1	A8713_08520	A8713_09625	Isomerase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.670
A8713_08520	ANH91668.1	A8713_08520	A8713_11190	Isomerase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.699
A8713_08520	ANH91669.1	A8713_08520	A8713_11195	Isomerase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.883
A8713_08520	ANH91778.1	A8713_08520	A8713_11865	Isomerase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.728
A8713_08520	ANH91779.1	A8713_08520	A8713_11870	Isomerase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.889
A8713_08520	ANH91803.1	A8713_08520	A8713_12025	Isomerase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.557
A8713_08520	ANH92151.1	A8713_08520	A8713_14070	Isomerase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.997
A8713_08520	ANH92564.1	A8713_08520	A8713_16520	Isomerase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.888
A8713_08520	ANH92565.1	A8713_08520	A8713_16525	Isomerase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.713
A8713_08520	ANH93358.1	A8713_08520	A8713_21135	Isomerase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.885
A8713_08520	ANH94090.1	A8713_08520	A8713_25340	Isomerase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.894
A8713_08520	ANH94345.1	A8713_08520	A8713_26810	Isomerase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.617
A8713_08520	ANH94375.1	A8713_08520	A8713_26980	Isomerase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.893
A8713_08520	ANH94377.1	A8713_08520	A8713_26990	Isomerase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.698
A8713_08520	ANH94905.1	A8713_08520	A8713_30120	Isomerase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.642
A8713_08520	ANH95209.1	A8713_08520	A8713_01845	Isomerase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.853
A8713_08520	ANH95313.1	A8713_08520	A8713_08525	Isomerase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
A8713_08520	ANH95340.1	A8713_08520	A8713_09630	Isomerase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.858