(80 nodes) ABC transporter type 1, transmembrane domain MetI-like network (Streptomyces sp. SAT1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANH93849.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)
	ANH94031.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
	ANH94032.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
	ANH94065.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)
	ANH94066.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
	ANH94090.1	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)
	ANH95666.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
	ANH94102.1	Sulfate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
	ANH95694.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
	ANH94345.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
	ANH94372.1	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa)
	ANH95697.1	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa)
	ANH94375.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
	ANH94377.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
	ANH94562.1	Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)
	ANH94622.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)
	ANH94623.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
	ANH94698.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)
	ANH94699.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)
	ANH94732.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)
	ANH94733.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa)
	ANH94905.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
	ANH95400.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (426 aa)
	ANH94980.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
	ANH94981.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (359 aa)
	ANH95773.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
	ANH91803.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
	ANH92224.1	Phosphate ABC transporter, permease protein PstA; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)
	ANH92225.1	Phosphate ABC transporter permease subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (336 aa)
	ANH92564.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
	ANH92565.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
	ANH93241.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
	ANH93242.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
	ANH93246.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
	ANH93247.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
	ANH93300.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)
	ANH93301.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
	ANH93358.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)
	ANH95579.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)
	ANH93381.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
	ANH93531.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
	ANH93533.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
	ANH93679.1	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (534 aa)
	ANH93715.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)
	ANH93716.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
	ANH93748.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)
	ANH95623.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (362 aa)
	ANH93798.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
	ANH93799.1	Glutamate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)
	ANH95171.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
	ANH95172.1	Polysaccharide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
	ANH89813.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)
	ANH89814.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa)
	ANH89836.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (596 aa)
	ANH89837.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)
	ANH95189.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
	ANH89903.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)
	ANH95209.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)
	ANH90031.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)
	ANH90512.1	Molybdenum ABC transporter permease subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (281 aa)
	ANH90657.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)
	ANH90714.1	Glycine/betaine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (871 aa)
	ANH90821.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)
	ANH90940.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
	ANH90941.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)
	ANH95313.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
	ANH91217.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
	ANH91403.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
	ANH95340.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
	ANH91533.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
	ANH91558.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)
	ANH91559.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)
	ANH91668.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
	ANH91669.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)
	ANH95379.1	Ectoine/hydroxyectoine ABC transporter permease subunit EhuC; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)
	ANH91693.1	Ectoine/hydroxyectoine ABC transporter permease subunit EhuD; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
	ANH95380.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
	ANH91706.1	2-aminoethylphosphonate ABC transporter permease subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
	ANH91778.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
	ANH91779.1	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)

Your Current Organism:

Streptomyces sp. SAT1

NCBI taxonomy Id: 1849967
Other names: S. sp. SAT1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANH89813.1	ANH89814.1	A8713_00605	A8713_00610	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.983
ANH89813.1	ANH89836.1	A8713_00605	A8713_00730	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.942
ANH89813.1	ANH93242.1	A8713_00605	A8713_20485	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.853
ANH89813.1	ANH93247.1	A8713_00605	A8713_20510	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.853
ANH89813.1	ANH93300.1	A8713_00605	A8713_20815	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.854
ANH89813.1	ANH93531.1	A8713_00605	A8713_22165	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.853
ANH89813.1	ANH93748.1	A8713_00605	A8713_23350	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.852
ANH89813.1	ANH94698.1	A8713_00605	A8713_28870	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.853
ANH89813.1	ANH95189.1	A8713_00605	A8713_01100	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.852
ANH89814.1	ANH89813.1	A8713_00610	A8713_00605	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.983
ANH89814.1	ANH89836.1	A8713_00610	A8713_00730	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.543
ANH89814.1	ANH89837.1	A8713_00610	A8713_00735	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.854
ANH89814.1	ANH89903.1	A8713_00610	A8713_01105	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.843
ANH89814.1	ANH93241.1	A8713_00610	A8713_20480	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.852
ANH89814.1	ANH93246.1	A8713_00610	A8713_20505	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.852
ANH89814.1	ANH93301.1	A8713_00610	A8713_20820	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.854
ANH89814.1	ANH93533.1	A8713_00610	A8713_22175	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.854
ANH89814.1	ANH94699.1	A8713_00610	A8713_28875	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.852
ANH89814.1	ANH95623.1	A8713_00610	A8713_23355	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.853
ANH89836.1	ANH89813.1	A8713_00730	A8713_00605	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.942