(25 nodes) Bacterial extracellular solute-binding protein network (Streptomyces sp. SAT1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANH89771.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (557 aa)
	ANH90030.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (432 aa)
	ANH90939.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (457 aa)
	A8713_08520	Isomerase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)
	ANH95341.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
	ANH91557.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (445 aa)
	ANH91670.1	Sugar-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (439 aa)
	ANH91780.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (436 aa)
	ANH95399.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (480 aa)
	ANH92123.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa)
	ANH95475.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (463 aa)
	ANH92523.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (418 aa)
	ANH92563.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (443 aa)
	ANH93357.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (427 aa)
	ANH93687.1	Polyamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (406 aa)
	ANH93713.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa)
	ANH94030.1	Carbohydrate ABC transporter, N-acetylglucosamine/diacetylchitobiose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (481 aa)
	ANH94091.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (427 aa)
	A8713_26800	Translation elongation factor G; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (438 aa)
	ANH94371.1	Spermidine/putrescine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (397 aa)
	ANH94374.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (449 aa)
	ANH94621.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (430 aa)
	ANH94661.1	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (419 aa)
	ANH94906.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (447 aa)
	ANH94982.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (444 aa)

Your Current Organism:

Streptomyces sp. SAT1

NCBI taxonomy Id: 1849967
Other names: S. sp. SAT1

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A8713_26800	ANH92563.1	A8713_26800	A8713_16515	Translation elongation factor G; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.492
ANH91557.1	ANH92523.1	A8713_10545	A8713_16270	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.578
ANH91557.1	ANH94661.1	A8713_10545	A8713_28660	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.453
ANH91780.1	ANH93357.1	A8713_11875	A8713_21130	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
ANH91780.1	ANH94661.1	A8713_11875	A8713_28660	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.922
ANH92123.1	ANH94621.1	A8713_13915	A8713_28430	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.433
ANH92123.1	ANH94982.1	A8713_13915	A8713_30585	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.611
ANH92523.1	ANH91557.1	A8713_16270	A8713_10545	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.578
ANH92523.1	ANH95475.1	A8713_16270	A8713_16245	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.519
ANH92563.1	A8713_26800	A8713_16515	A8713_26800	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Translation elongation factor G; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.492
ANH93357.1	ANH91780.1	A8713_21130	A8713_11875	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
ANH93357.1	ANH94374.1	A8713_21130	A8713_26975	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.439
ANH93357.1	ANH94661.1	A8713_21130	A8713_28660	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.923
ANH93357.1	ANH94982.1	A8713_21130	A8713_30585	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.450
ANH93357.1	ANH95475.1	A8713_21130	A8713_16245	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.504
ANH93687.1	ANH93713.1	A8713_23020	A8713_23175	Polyamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.907
ANH93713.1	ANH93687.1	A8713_23175	A8713_23020	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.907
ANH93713.1	ANH94371.1	A8713_23175	A8713_26955	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.694
ANH94030.1	ANH94091.1	A8713_25030	A8713_25350	Carbohydrate ABC transporter, N-acetylglucosamine/diacetylchitobiose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.411
ANH94091.1	ANH94030.1	A8713_25350	A8713_25030	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbohydrate ABC transporter, N-acetylglucosamine/diacetylchitobiose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.411