(22 nodes) ABC transporter type 1, transmembrane domain superfamily network (Streptomyces sp. SAT1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANH90374.1	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (600 aa)
	ANH90377.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (628 aa)
	ANH90378.1	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (593 aa)
	ANH91391.1	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (577 aa)
	ANH91392.1	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (642 aa)
	ANH91641.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (1246 aa)
	ANH92373.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (1172 aa)
	ANH93505.1	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (615 aa)
	ANH93506.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (598 aa)
	ANH93510.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (630 aa)
	ANH93511.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (668 aa)
	ANH93860.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (579 aa)
	ANH93861.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (608 aa)
	ANH95751.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (542 aa)
	ANH95752.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (588 aa)
	ANH95755.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (613 aa)
	ANH95754.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (625 aa)
	ANH94941.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (574 aa)
	ANH94942.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (681 aa)
	ANH95091.1	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (595 aa)
	ANH95093.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (567 aa)
	ANH95107.1	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (632 aa)

Your Current Organism:

Streptomyces sp. SAT1

NCBI taxonomy Id: 1849967
Other names: S. sp. SAT1

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANH90377.1	ANH90378.1	A8713_03810	A8713_03815	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.853
ANH90378.1	ANH90377.1	A8713_03815	A8713_03810	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.853
ANH90378.1	ANH95751.1	A8713_03815	A8713_29320	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.422
ANH91391.1	ANH91392.1	A8713_09550	A8713_09555	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.856
ANH91392.1	ANH91391.1	A8713_09555	A8713_09550	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.856
ANH93505.1	ANH93506.1	A8713_22005	A8713_22010	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.853
ANH93505.1	ANH95751.1	A8713_22005	A8713_29320	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.561
ANH93506.1	ANH93505.1	A8713_22010	A8713_22005	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.853
ANH93506.1	ANH95091.1	A8713_22010	A8713_31210	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.559
ANH93510.1	ANH93511.1	A8713_22035	A8713_22040	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.855
ANH93511.1	ANH93510.1	A8713_22040	A8713_22035	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.855
ANH93860.1	ANH93861.1	A8713_24000	A8713_24005	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.909
ANH93861.1	ANH93860.1	A8713_24005	A8713_24000	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.909
ANH94941.1	ANH94942.1	A8713_30350	A8713_30355	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.877
ANH94941.1	ANH95751.1	A8713_30350	A8713_29320	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
ANH94942.1	ANH94941.1	A8713_30355	A8713_30350	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.877
ANH95091.1	ANH93506.1	A8713_31210	A8713_22010	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.559
ANH95091.1	ANH95093.1	A8713_31210	A8713_31220	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.748
ANH95091.1	ANH95751.1	A8713_31210	A8713_29320	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.817
ANH95093.1	ANH95091.1	A8713_31220	A8713_31210	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.748