(5 nodes) Permease family network (Streptomyces sp. SAT1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANH94152.1	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa)
	ANH90577.1	Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (469 aa)
	ANH92079.1	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (482 aa)
	ANH94195.1	Uracil permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (469 aa)
	ANH95677.1	Uracil permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (447 aa)

Your Current Organism:

Streptomyces sp. SAT1

NCBI taxonomy Id: 1849967
Other names: S. sp. SAT1

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANH90577.1	ANH92079.1	A8713_04920	A8713_13685	Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.677
ANH90577.1	ANH94152.1	A8713_04920	A8713_25690	Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.680
ANH92079.1	ANH90577.1	A8713_13685	A8713_04920	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.677
ANH92079.1	ANH94195.1	A8713_13685	A8713_25930	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Uracil permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.450
ANH92079.1	ANH95677.1	A8713_13685	A8713_25940	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Uracil permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.434
ANH94152.1	ANH90577.1	A8713_25690	A8713_04920	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.680
ANH94152.1	ANH94195.1	A8713_25690	A8713_25930	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Uracil permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.468
ANH94152.1	ANH95677.1	A8713_25690	A8713_25940	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Uracil permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.449
ANH94195.1	ANH92079.1	A8713_25930	A8713_13685	Uracil permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.450
ANH94195.1	ANH94152.1	A8713_25930	A8713_25690	Uracil permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.468
ANH95677.1	ANH92079.1	A8713_25940	A8713_13685	Uracil permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.434
ANH95677.1	ANH94152.1	A8713_25940	A8713_25690	Uracil permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.449