STRINGSTRING
AOZ68109.1 AOZ68109.1 AOZ67978.1 AOZ67978.1 AOZ68080.1 AOZ68080.1 AOZ68085.1 AOZ68085.1 dapB dapB AOZ68304.1 AOZ68304.1 AOZ68375.1 AOZ68375.1 AOZ68481.1 AOZ68481.1 AOZ68482.1 AOZ68482.1 AOZ68483.1 AOZ68483.1 AOZ68485.1 AOZ68485.1 AOZ68545.1 AOZ68545.1 AOZ70886.1 AOZ70886.1 AOZ68771.1 AOZ68771.1 AOZ68809.1 AOZ68809.1 AOZ69043.1 AOZ69043.1 AOZ69170.1 AOZ69170.1 AOZ69526.1 AOZ69526.1 dusA dusA AOZ69699.1 AOZ69699.1 AOZ69773.1 AOZ69773.1 AOZ69880.1 AOZ69880.1 AOZ69897.1 AOZ69897.1 AOZ69906.1 AOZ69906.1 LPB142_13630 LPB142_13630 AOZ70313.1 AOZ70313.1 AOZ70431.1 AOZ70431.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AOZ68109.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)
AOZ67978.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (402 aa)
AOZ68080.1Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (385 aa)
AOZ68085.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (154 aa)
dapB4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (269 aa)
AOZ68304.1cobalt-precorrin-6A reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
AOZ68375.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (563 aa)
AOZ68481.1Succinate dehydrogenase, cytochrome b556 subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa)
AOZ68482.1Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (133 aa)
AOZ68483.1Succinate dehydrogenase flavoprotein subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (601 aa)
AOZ68485.1Succinate dehydrogenase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (258 aa)
AOZ68545.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (591 aa)
AOZ70886.1Enoyl-[acyl-carrier-protein] reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
AOZ68771.1Cyclohexadienyl dehydrogenase; Dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
AOZ68809.1enoyl-ACP reductase; Catalyzes a key regulatory step in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
AOZ69043.1Enoyl-[acyl-carrier-protein] reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
AOZ69170.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (486 aa)
AOZ69526.1tRNA dihydrouridine synthase DusB; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (324 aa)
dusAtRNA dihydrouridine(20/20a) synthase DusA; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily. (329 aa)
AOZ69699.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)
AOZ69773.1acyl-CoA dehydrogenase; Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (386 aa)
AOZ69880.1Dihydropyrimidine dehydrogenase subunit B; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. (432 aa)
AOZ69897.1Dihydroorotate dehydrogenase (quinone); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (352 aa)
AOZ69906.1Pyridoxamine 5-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa)
LPB142_13630ATP-dependent RNA helicase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
AOZ70313.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (553 aa)
AOZ70431.1Oxygen-independent coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (451 aa)
Your Current Organism:
Rhodobacter sp. LPB0142
NCBI taxonomy Id: 1850250
Other names: R. sp. LPB0142
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