STRINGSTRING
hndC_3 hndC_3 hoxF hoxF hndC_1 hndC_1 rnfC rnfC hndC_2 hndC_2 hndC_4 hndC_4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hndC_3NADP-reducing hydrogenase subunit HndC. (1063 aa)
hoxFNAD-reducing hydrogenase HoxS subunit alpha. (401 aa)
hndC_1NADP-reducing hydrogenase subunit HndC. (782 aa)
rnfCNitrogen fixation protein RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. (448 aa)
hndC_2NADP-reducing hydrogenase subunit HndC. (511 aa)
hndC_4NADP-reducing hydrogenase subunit HndC. (631 aa)
Your Current Organism:
Limihaloglobus sulfuriphilus
NCBI taxonomy Id: 1851148
Other names: DSM 100118, JCM 31927, KCTC 15601, L. sulfuriphilus, Limihaloglobus sulfuriphilus Pradel et al., Phycisphaerae bacterium SM-Chi-D1, strain SM-Chi-D1
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