(23 nodes) Oxidative phosphorylation network (Limihaloglobus sulfuriphilus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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Your Input:
	hndA_1	NADP-reducing hydrogenase subunit HndA. (141 aa)
	ntpD	V-type sodium pump subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane. (205 aa)
	ntpB	V-type sodium pump subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. (471 aa)
	ntpA	V-type sodium ATPase catalytic subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (586 aa)
	AQQ69738.1	V-type ATP synthase subunit F. (111 aa)
	AQQ69739.1	V-type ATP synthase subunit C. (346 aa)
	atpE-2	V-type ATP synthase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane. (195 aa)
	ntpK	Sodium ATPase proteolipid component; Belongs to the V-ATPase proteolipid subunit family. (164 aa)
	AQQ69742.1	V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family. (660 aa)
	AQQ69743.1	Hypothetical protein. (106 aa)
	hndC_1	NADP-reducing hydrogenase subunit HndC. (782 aa)
	hndC_3	NADP-reducing hydrogenase subunit HndC. (1063 aa)
	hndA_4	NADP-reducing hydrogenase subunit HndA. (168 aa)
	hndC_4	NADP-reducing hydrogenase subunit HndC. (631 aa)
	hndD_4	NADP-reducing hydrogenase subunit HndC. (665 aa)
	atpB	F-ATPase subunit 6; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. (259 aa)
	atpE	Lipid-binding protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (94 aa)
	atpF	F-type ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (206 aa)
	atpH	F-type ATPase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (184 aa)
	atpA	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. (508 aa)
	atpG	F-ATPase gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (297 aa)
	atpD	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. (474 aa)
	AQQ72174.1	F0F1 ATP synthase subunit epsilon. (143 aa)

Your Current Organism:

Limihaloglobus sulfuriphilus

NCBI taxonomy Id: 1851148
Other names: DSM 100118, JCM 31927, KCTC 15601, L. sulfuriphilus, Limihaloglobus sulfuriphilus Pradel et al., Phycisphaerae bacterium SM-Chi-D1, strain SM-Chi-D1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQQ69738.1	AQQ69739.1	SMSP2_00069	SMSP2_00070	V-type ATP synthase subunit F.	V-type ATP synthase subunit C.	0.999
AQQ69738.1	AQQ69742.1	SMSP2_00069	SMSP2_00073	V-type ATP synthase subunit F.	V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	0.993
AQQ69738.1	AQQ69743.1	SMSP2_00069	SMSP2_00074	V-type ATP synthase subunit F.	Hypothetical protein.	0.617
AQQ69738.1	atpE	SMSP2_00069	SMSP2_02549	V-type ATP synthase subunit F.	Lipid-binding protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.	0.938
AQQ69738.1	atpE-2	SMSP2_00069	SMSP2_00071	V-type ATP synthase subunit F.	V-type ATP synthase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
AQQ69738.1	hndC_1	SMSP2_00069	SMSP2_00104	V-type ATP synthase subunit F.	NADP-reducing hydrogenase subunit HndC.	0.662
AQQ69738.1	ntpA	SMSP2_00069	SMSP2_00068	V-type ATP synthase subunit F.	V-type sodium ATPase catalytic subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.	0.997
AQQ69738.1	ntpB	SMSP2_00069	SMSP2_00067	V-type ATP synthase subunit F.	V-type sodium pump subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.	0.997
AQQ69738.1	ntpD	SMSP2_00069	SMSP2_00066	V-type ATP synthase subunit F.	V-type sodium pump subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.997
AQQ69738.1	ntpK	SMSP2_00069	SMSP2_00072	V-type ATP synthase subunit F.	Sodium ATPase proteolipid component; Belongs to the V-ATPase proteolipid subunit family.	0.995
AQQ69739.1	AQQ69738.1	SMSP2_00070	SMSP2_00069	V-type ATP synthase subunit C.	V-type ATP synthase subunit F.	0.999
AQQ69739.1	AQQ69742.1	SMSP2_00070	SMSP2_00073	V-type ATP synthase subunit C.	V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	0.997
AQQ69739.1	AQQ69743.1	SMSP2_00070	SMSP2_00074	V-type ATP synthase subunit C.	Hypothetical protein.	0.617
AQQ69739.1	atpE	SMSP2_00070	SMSP2_02549	V-type ATP synthase subunit C.	Lipid-binding protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.	0.974
AQQ69739.1	atpE-2	SMSP2_00070	SMSP2_00071	V-type ATP synthase subunit C.	V-type ATP synthase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
AQQ69739.1	ntpA	SMSP2_00070	SMSP2_00068	V-type ATP synthase subunit C.	V-type sodium ATPase catalytic subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.	0.998
AQQ69739.1	ntpB	SMSP2_00070	SMSP2_00067	V-type ATP synthase subunit C.	V-type sodium pump subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.	0.998
AQQ69739.1	ntpD	SMSP2_00070	SMSP2_00066	V-type ATP synthase subunit C.	V-type sodium pump subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.998
AQQ69739.1	ntpK	SMSP2_00070	SMSP2_00072	V-type ATP synthase subunit C.	Sodium ATPase proteolipid component; Belongs to the V-ATPase proteolipid subunit family.	0.998
AQQ69742.1	AQQ69738.1	SMSP2_00073	SMSP2_00069	V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	V-type ATP synthase subunit F.	0.993

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