STRINGSTRING
ODI_00198 ODI_00198 ODI_00360 ODI_00360 ODI_00361 ODI_00361 serC serC ODI_02310 ODI_02310 ODI_02769 ODI_02769 ODI_03438 ODI_03438 ODI_03439 ODI_03439 ODI_03440 ODI_03440 ODI_04144 ODI_04144 ODI_04261 ODI_04261 ODI_04264 ODI_04264 ODI_04265 ODI_04265 gpmA gpmA ODI_04267 ODI_04267 ODI_04268 ODI_04268 ODI_04353 ODI_04353
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ODI_00198D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (324 aa)
ODI_00360Hypothetical protein. (47 aa)
ODI_00361Hypothetical, related to broad specificity phosphatases COG0406. (219 aa)
serCPhosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. (380 aa)
ODI_02310Uracil-DNA glycosylase, family 4. (312 aa)
ODI_02769Carboxyl-terminal protease. (485 aa)
ODI_03438Hypothetical protein. (354 aa)
ODI_03439D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (306 aa)
ODI_03440Putative exported protein. (314 aa)
ODI_04144D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (312 aa)
ODI_04261Putative exported protein. (332 aa)
ODI_04264Glutaredoxin 3 (Grx3); Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins. (85 aa)
ODI_04265FIG136845: Rhodanese-related sulfurtransferase. (139 aa)
gpmAPhosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (250 aa)
ODI_04267Cell wall endopeptidase, family M23/M37. (500 aa)
ODI_04268Carboxyl-terminal protease; Belongs to the peptidase S41A family. (485 aa)
ODI_04353D-3-phosphoglycerate dehydrogenase. (399 aa)
Your Current Organism:
Orrella dioscoreae
NCBI taxonomy Id: 1851544
Other names: Alcaligenaceae bacterium LMG 29303, CIP 111009, LMG 29303, LMG:29303, O. dioscoreae
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