(18 nodes) Mixed, incl. HlyD family secretion protein, and Negative regulation by symbiont of host apoptotic process network (Orrella dioscoreae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ODI_02655	Peptidase M50. (740 aa)
	ODI_02656	Membrane-fusion protein. (458 aa)
	ODI_02657	Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (271 aa)
	ODI_02658	Outer membrane protein assembly factor YaeT precursor. (563 aa)
	ODI_02659	Predicted cell-wall-anchored protein SasA (LPXTG motif). (3364 aa)
	ODI_02660	FIG00905286: hypothetical protein. (521 aa)
	ODI_02661	Hypothetical protein. (198 aa)
	ODI_02662	Hypothetical protein. (169 aa)
	ODI_02663	FOG: TPR repeat. (317 aa)
	ODI_02664	Type II/IV secretion system protein TadC, associated with Flp pilus assembly. (314 aa)
	ODI_02665	Flp pilus assembly protein TadB. (327 aa)
	ODI_02666	Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily. (475 aa)
	ODI_02667	Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly. (426 aa)
	ODI_02668	Flp pilus assembly protein CpaD. (230 aa)
	ODI_02669	Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly; Belongs to the bacterial secretin family. (510 aa)
	ODI_02670	Flp pilus assembly protein RcpC/CpaB. (315 aa)
	ODI_02671	Type IV prepilin peptidase TadV/CpaA. (176 aa)
	ODI_02672	Flp pilus assembly protein, pilin Flp. (67 aa)

Your Current Organism:

Orrella dioscoreae

NCBI taxonomy Id: 1851544
Other names: Alcaligenaceae bacterium LMG 29303, CIP 111009, LMG 29303, LMG:29303, O. dioscoreae

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ODI_02655	ODI_02656	Peptidase M50.	Membrane-fusion protein.	0.952
ODI_02655	ODI_02657	Peptidase M50.	Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.922
ODI_02655	ODI_02658	Peptidase M50.	Outer membrane protein assembly factor YaeT precursor.	0.951
ODI_02655	ODI_02659	Peptidase M50.	Predicted cell-wall-anchored protein SasA (LPXTG motif).	0.856
ODI_02655	ODI_02660	Peptidase M50.	FIG00905286: hypothetical protein.	0.792
ODI_02655	ODI_02661	Peptidase M50.	Hypothetical protein.	0.497
ODI_02655	ODI_02662	Peptidase M50.	Hypothetical protein.	0.500
ODI_02655	ODI_02663	Peptidase M50.	FOG: TPR repeat.	0.691
ODI_02655	ODI_02664	Peptidase M50.	Type II/IV secretion system protein TadC, associated with Flp pilus assembly.	0.601
ODI_02655	ODI_02665	Peptidase M50.	Flp pilus assembly protein TadB.	0.586
ODI_02655	ODI_02666	Peptidase M50.	Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily.	0.509
ODI_02655	ODI_02667	Peptidase M50.	Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly.	0.673
ODI_02655	ODI_02668	Peptidase M50.	Flp pilus assembly protein CpaD.	0.418
ODI_02655	ODI_02669	Peptidase M50.	Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly; Belongs to the bacterial secretin family.	0.511
ODI_02655	ODI_02670	Peptidase M50.	Flp pilus assembly protein RcpC/CpaB.	0.494
ODI_02655	ODI_02671	Peptidase M50.	Type IV prepilin peptidase TadV/CpaA.	0.439
ODI_02656	ODI_02655	Membrane-fusion protein.	Peptidase M50.	0.952
ODI_02656	ODI_02657	Membrane-fusion protein.	Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.925
ODI_02656	ODI_02658	Membrane-fusion protein.	Outer membrane protein assembly factor YaeT precursor.	0.951
ODI_02656	ODI_02659	Membrane-fusion protein.	Predicted cell-wall-anchored protein SasA (LPXTG motif).	0.838