(11 nodes) Mixed, incl. Negative regulation by symbiont of host apoptotic process, and Type II secretion system (T2SS), protein F network (Orrella dioscoreae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ODI_02659	Predicted cell-wall-anchored protein SasA (LPXTG motif). (3364 aa)
	ODI_02660	FIG00905286: hypothetical protein. (521 aa)
	ODI_02661	Hypothetical protein. (198 aa)
	ODI_02662	Hypothetical protein. (169 aa)
	ODI_02663	FOG: TPR repeat. (317 aa)
	ODI_02664	Type II/IV secretion system protein TadC, associated with Flp pilus assembly. (314 aa)
	ODI_02665	Flp pilus assembly protein TadB. (327 aa)
	ODI_02666	Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily. (475 aa)
	ODI_02667	Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly. (426 aa)
	ODI_02669	Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly; Belongs to the bacterial secretin family. (510 aa)
	ODI_02670	Flp pilus assembly protein RcpC/CpaB. (315 aa)

Your Current Organism:

Orrella dioscoreae

NCBI taxonomy Id: 1851544
Other names: Alcaligenaceae bacterium LMG 29303, CIP 111009, LMG 29303, LMG:29303, O. dioscoreae

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ODI_02659	ODI_02660	Predicted cell-wall-anchored protein SasA (LPXTG motif).	FIG00905286: hypothetical protein.	0.930
ODI_02659	ODI_02661	Predicted cell-wall-anchored protein SasA (LPXTG motif).	Hypothetical protein.	0.661
ODI_02659	ODI_02662	Predicted cell-wall-anchored protein SasA (LPXTG motif).	Hypothetical protein.	0.661
ODI_02659	ODI_02663	Predicted cell-wall-anchored protein SasA (LPXTG motif).	FOG: TPR repeat.	0.909
ODI_02659	ODI_02664	Predicted cell-wall-anchored protein SasA (LPXTG motif).	Type II/IV secretion system protein TadC, associated with Flp pilus assembly.	0.794
ODI_02659	ODI_02665	Predicted cell-wall-anchored protein SasA (LPXTG motif).	Flp pilus assembly protein TadB.	0.792
ODI_02659	ODI_02666	Predicted cell-wall-anchored protein SasA (LPXTG motif).	Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily.	0.654
ODI_02659	ODI_02667	Predicted cell-wall-anchored protein SasA (LPXTG motif).	Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly.	0.842
ODI_02659	ODI_02669	Predicted cell-wall-anchored protein SasA (LPXTG motif).	Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly; Belongs to the bacterial secretin family.	0.700
ODI_02659	ODI_02670	Predicted cell-wall-anchored protein SasA (LPXTG motif).	Flp pilus assembly protein RcpC/CpaB.	0.672
ODI_02660	ODI_02659	FIG00905286: hypothetical protein.	Predicted cell-wall-anchored protein SasA (LPXTG motif).	0.930
ODI_02660	ODI_02661	FIG00905286: hypothetical protein.	Hypothetical protein.	0.776
ODI_02660	ODI_02662	FIG00905286: hypothetical protein.	Hypothetical protein.	0.787
ODI_02660	ODI_02663	FIG00905286: hypothetical protein.	FOG: TPR repeat.	0.955
ODI_02660	ODI_02664	FIG00905286: hypothetical protein.	Type II/IV secretion system protein TadC, associated with Flp pilus assembly.	0.928
ODI_02660	ODI_02665	FIG00905286: hypothetical protein.	Flp pilus assembly protein TadB.	0.933
ODI_02660	ODI_02666	FIG00905286: hypothetical protein.	Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily.	0.847
ODI_02660	ODI_02667	FIG00905286: hypothetical protein.	Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly.	0.954
ODI_02660	ODI_02669	FIG00905286: hypothetical protein.	Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly; Belongs to the bacterial secretin family.	0.866
ODI_02660	ODI_02670	FIG00905286: hypothetical protein.	Flp pilus assembly protein RcpC/CpaB.	0.896