(5 nodes) Mixed, incl. ArsC family, and Bacterial extracellular solute-binding protein network (Orrella dioscoreae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ODI_00563	Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family. (117 aa)
	ODI_00564	Putrescine transport system permease protein PotI (TC 3.A.1.11.2). (270 aa)
	ODI_00565	Putrescine transport system permease protein PotH (TC 3.A.1.11.2). (306 aa)
	potA	Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2); Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (376 aa)
	ODI_00567	Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2); Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family. (374 aa)

Your Current Organism:

Orrella dioscoreae

NCBI taxonomy Id: 1851544
Other names: Alcaligenaceae bacterium LMG 29303, CIP 111009, LMG 29303, LMG:29303, O. dioscoreae

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ODI_00563	ODI_00564	ODI_00563	ODI_00564	Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family.	Putrescine transport system permease protein PotI (TC 3.A.1.11.2).	0.854
ODI_00563	ODI_00565	ODI_00563	ODI_00565	Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family.	Putrescine transport system permease protein PotH (TC 3.A.1.11.2).	0.854
ODI_00563	ODI_00567	ODI_00563	ODI_00567	Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family.	Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2); Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	0.856
ODI_00563	potA	ODI_00563	ODI_00566	Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family.	Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2); Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.854
ODI_00564	ODI_00563	ODI_00564	ODI_00563	Putrescine transport system permease protein PotI (TC 3.A.1.11.2).	Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family.	0.854
ODI_00564	ODI_00565	ODI_00564	ODI_00565	Putrescine transport system permease protein PotI (TC 3.A.1.11.2).	Putrescine transport system permease protein PotH (TC 3.A.1.11.2).	0.999
ODI_00564	ODI_00567	ODI_00564	ODI_00567	Putrescine transport system permease protein PotI (TC 3.A.1.11.2).	Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2); Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	0.999
ODI_00564	potA	ODI_00564	ODI_00566	Putrescine transport system permease protein PotI (TC 3.A.1.11.2).	Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2); Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.995
ODI_00565	ODI_00563	ODI_00565	ODI_00563	Putrescine transport system permease protein PotH (TC 3.A.1.11.2).	Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family.	0.854
ODI_00565	ODI_00564	ODI_00565	ODI_00564	Putrescine transport system permease protein PotH (TC 3.A.1.11.2).	Putrescine transport system permease protein PotI (TC 3.A.1.11.2).	0.999
ODI_00565	ODI_00567	ODI_00565	ODI_00567	Putrescine transport system permease protein PotH (TC 3.A.1.11.2).	Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2); Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	0.997
ODI_00565	potA	ODI_00565	ODI_00566	Putrescine transport system permease protein PotH (TC 3.A.1.11.2).	Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2); Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.997
ODI_00567	ODI_00563	ODI_00567	ODI_00563	Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2); Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family.	0.856
ODI_00567	ODI_00564	ODI_00567	ODI_00564	Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2); Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Putrescine transport system permease protein PotI (TC 3.A.1.11.2).	0.999
ODI_00567	ODI_00565	ODI_00567	ODI_00565	Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2); Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Putrescine transport system permease protein PotH (TC 3.A.1.11.2).	0.997
ODI_00567	potA	ODI_00567	ODI_00566	Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2); Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2); Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.996
potA	ODI_00563	ODI_00566	ODI_00563	Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2); Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family.	0.854
potA	ODI_00564	ODI_00566	ODI_00564	Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2); Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	Putrescine transport system permease protein PotI (TC 3.A.1.11.2).	0.995
potA	ODI_00565	ODI_00566	ODI_00565	Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2); Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	Putrescine transport system permease protein PotH (TC 3.A.1.11.2).	0.997
potA	ODI_00567	ODI_00566	ODI_00567	Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2); Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2); Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	0.996