17 items (Orrella dioscoreae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ugpC	Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3); Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family. (362 aa)
	ugpE	Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3); Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (282 aa)
	ODI_00450	Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3). (293 aa)
	ODI_00451	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3). (436 aa)
	ODI_03151	Multiple sugar transport system substrate-binding protein; Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3). (420 aa)
	ODI_03152	Sugar ABC transporter, permease protein. (280 aa)
	ODI_03153	N-Acetyl-D-glucosamine ABC transport system, permease protein 1. (290 aa)
	ODI_03154	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1); Belongs to the ABC transporter superfamily. (378 aa)
	ODI_03293	Various polyols ABC transporter, permease component 2. (275 aa)
	ODI_03294	Maltose/maltodextrin ABC transporter, permease protein MalF. (292 aa)
	ODI_03295	Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3). (472 aa)
	ODI_03296	Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3); Belongs to the ABC transporter superfamily. (377 aa)
	ODI_03297	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1); Belongs to the ABC transporter superfamily. (370 aa)
	ODI_04052	Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3); Belongs to the ABC transporter superfamily. (357 aa)
	ODI_04053	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3). (431 aa)
	ODI_04054	Multiple sugar ABC transporter, membrane-spanning permease protein MsmF. (299 aa)
	ODI_04055	Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3). (266 aa)

Your Current Organism:

Orrella dioscoreae

NCBI taxonomy Id: 1851544
Other names: Alcaligenaceae bacterium LMG 29303, CIP 111009, LMG 29303, LMG:29303, O. dioscoreae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ODI_00450	ODI_00451	ODI_00450	ODI_00451	Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3).	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3).	0.995
ODI_00450	ODI_03151	ODI_00450	ODI_03151	Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3).	Multiple sugar transport system substrate-binding protein; Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3).	0.888
ODI_00450	ODI_03152	ODI_00450	ODI_03152	Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3).	Sugar ABC transporter, permease protein.	0.927
ODI_00450	ODI_03154	ODI_00450	ODI_03154	Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3).	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1); Belongs to the ABC transporter superfamily.	0.856
ODI_00450	ODI_03293	ODI_00450	ODI_03293	Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3).	Various polyols ABC transporter, permease component 2.	0.922
ODI_00450	ODI_03295	ODI_00450	ODI_03295	Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3).	Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3).	0.647
ODI_00450	ODI_03296	ODI_00450	ODI_03296	Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3).	Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3); Belongs to the ABC transporter superfamily.	0.811
ODI_00450	ODI_03297	ODI_00450	ODI_03297	Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3).	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1); Belongs to the ABC transporter superfamily.	0.854
ODI_00450	ODI_04052	ODI_00450	ODI_04052	Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3).	Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3); Belongs to the ABC transporter superfamily.	0.972
ODI_00450	ODI_04053	ODI_00450	ODI_04053	Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3).	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3).	0.976
ODI_00450	ODI_04054	ODI_00450	ODI_04054	Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3).	Multiple sugar ABC transporter, membrane-spanning permease protein MsmF.	0.921
ODI_00450	ODI_04055	ODI_00450	ODI_04055	Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3).	Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3).	0.984
ODI_00450	ugpC	ODI_00450	ODI_00448	Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3).	Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3); Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.	0.997
ODI_00450	ugpE	ODI_00450	ODI_00449	Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3).	Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3); Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.	0.998
ODI_00451	ODI_00450	ODI_00451	ODI_00450	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3).	Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3).	0.995
ODI_00451	ODI_03152	ODI_00451	ODI_03152	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3).	Sugar ABC transporter, permease protein.	0.835
ODI_00451	ODI_03153	ODI_00451	ODI_03153	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3).	N-Acetyl-D-glucosamine ABC transport system, permease protein 1.	0.822
ODI_00451	ODI_03154	ODI_00451	ODI_03154	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3).	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1); Belongs to the ABC transporter superfamily.	0.625
ODI_00451	ODI_03293	ODI_00451	ODI_03293	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3).	Various polyols ABC transporter, permease component 2.	0.728
ODI_00451	ODI_03294	ODI_00451	ODI_03294	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3).	Maltose/maltodextrin ABC transporter, permease protein MalF.	0.763