7 items (Orrella dioscoreae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ODI_04055	Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3). (266 aa)
	ODI_04052	Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3); Belongs to the ABC transporter superfamily. (357 aa)
	ugpC	Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3); Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family. (362 aa)
	ODI_03152	Sugar ABC transporter, permease protein. (280 aa)
	ODI_03297	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1); Belongs to the ABC transporter superfamily. (370 aa)
	ODI_03154	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1); Belongs to the ABC transporter superfamily. (378 aa)
	ugpE	Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3); Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (282 aa)

Your Current Organism:

Orrella dioscoreae

NCBI taxonomy Id: 1851544
Other names: Alcaligenaceae bacterium LMG 29303, CIP 111009, LMG 29303, LMG:29303, O. dioscoreae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ODI_03152	ODI_03154	ODI_03152	ODI_03154	Sugar ABC transporter, permease protein.	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1); Belongs to the ABC transporter superfamily.	0.975
ODI_03152	ODI_03297	ODI_03152	ODI_03297	Sugar ABC transporter, permease protein.	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1); Belongs to the ABC transporter superfamily.	0.894
ODI_03152	ODI_04052	ODI_03152	ODI_04052	Sugar ABC transporter, permease protein.	Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3); Belongs to the ABC transporter superfamily.	0.895
ODI_03152	ugpC	ODI_03152	ODI_00448	Sugar ABC transporter, permease protein.	Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3); Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.	0.908
ODI_03154	ODI_03152	ODI_03154	ODI_03152	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1); Belongs to the ABC transporter superfamily.	Sugar ABC transporter, permease protein.	0.975
ODI_03154	ODI_03297	ODI_03154	ODI_03297	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1); Belongs to the ABC transporter superfamily.	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1); Belongs to the ABC transporter superfamily.	0.917
ODI_03154	ODI_04052	ODI_03154	ODI_04052	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1); Belongs to the ABC transporter superfamily.	Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3); Belongs to the ABC transporter superfamily.	0.438
ODI_03154	ODI_04055	ODI_03154	ODI_04055	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1); Belongs to the ABC transporter superfamily.	Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3).	0.858
ODI_03154	ugpE	ODI_03154	ODI_00449	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1); Belongs to the ABC transporter superfamily.	Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3); Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.	0.897
ODI_03297	ODI_03152	ODI_03297	ODI_03152	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1); Belongs to the ABC transporter superfamily.	Sugar ABC transporter, permease protein.	0.894
ODI_03297	ODI_03154	ODI_03297	ODI_03154	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1); Belongs to the ABC transporter superfamily.	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1); Belongs to the ABC transporter superfamily.	0.917
ODI_03297	ODI_04055	ODI_03297	ODI_04055	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1); Belongs to the ABC transporter superfamily.	Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3).	0.870
ODI_03297	ugpE	ODI_03297	ODI_00449	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1); Belongs to the ABC transporter superfamily.	Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3); Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.	0.838
ODI_04052	ODI_03152	ODI_04052	ODI_03152	Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3); Belongs to the ABC transporter superfamily.	Sugar ABC transporter, permease protein.	0.895
ODI_04052	ODI_03154	ODI_04052	ODI_03154	Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3); Belongs to the ABC transporter superfamily.	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1); Belongs to the ABC transporter superfamily.	0.438
ODI_04052	ODI_04055	ODI_04052	ODI_04055	Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3); Belongs to the ABC transporter superfamily.	Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3).	0.993
ODI_04052	ugpC	ODI_04052	ODI_00448	Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3); Belongs to the ABC transporter superfamily.	Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3); Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.	0.909
ODI_04052	ugpE	ODI_04052	ODI_00449	Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3); Belongs to the ABC transporter superfamily.	Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3); Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.	0.969
ODI_04055	ODI_03154	ODI_04055	ODI_03154	Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3).	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1); Belongs to the ABC transporter superfamily.	0.858
ODI_04055	ODI_03297	ODI_04055	ODI_03297	Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3).	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1); Belongs to the ABC transporter superfamily.	0.870