STRINGSTRING
ugpC ugpC ODI_03297 ODI_03297 ODI_03154 ODI_03154 ODI_04052 ODI_04052
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ugpCGlycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3); Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family. (362 aa)
ODI_03297Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1); Belongs to the ABC transporter superfamily. (370 aa)
ODI_03154Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1); Belongs to the ABC transporter superfamily. (378 aa)
ODI_04052Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3); Belongs to the ABC transporter superfamily. (357 aa)
Your Current Organism:
Orrella dioscoreae
NCBI taxonomy Id: 1851544
Other names: Alcaligenaceae bacterium LMG 29303, CIP 111009, LMG 29303, LMG:29303, O. dioscoreae
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