(8 nodes) Type II secretion system protein GspF domain network (Orrella dioscoreae)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ODI_01969	General secretion pathway protein F. (402 aa)
	ODI_02056	Type II/IV secretion system protein TadC, associated with Flp pilus assembly. (278 aa)
	ODI_02057	Flp pilus assembly protein TadB. (281 aa)
	ODI_02411	General secretion pathway protein F. (400 aa)
	ODI_02664	Type II/IV secretion system protein TadC, associated with Flp pilus assembly. (314 aa)
	ODI_02665	Flp pilus assembly protein TadB. (327 aa)
	ODI_02986	Type II/IV secretion system protein TadC, associated with Flp pilus assembly. (336 aa)
	ODI_02987	Flp pilus assembly protein TadB. (308 aa)

Your Current Organism:

Orrella dioscoreae

NCBI taxonomy Id: 1851544
Other names: Alcaligenaceae bacterium LMG 29303, CIP 111009, LMG 29303, LMG:29303, O. dioscoreae

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ODI_01969	ODI_02411	General secretion pathway protein F.	General secretion pathway protein F.	0.901
ODI_02056	ODI_02057	Type II/IV secretion system protein TadC, associated with Flp pilus assembly.	Flp pilus assembly protein TadB.	0.910
ODI_02056	ODI_02664	Type II/IV secretion system protein TadC, associated with Flp pilus assembly.	Type II/IV secretion system protein TadC, associated with Flp pilus assembly.	0.742
ODI_02056	ODI_02665	Type II/IV secretion system protein TadC, associated with Flp pilus assembly.	Flp pilus assembly protein TadB.	0.799
ODI_02056	ODI_02986	Type II/IV secretion system protein TadC, associated with Flp pilus assembly.	Type II/IV secretion system protein TadC, associated with Flp pilus assembly.	0.908
ODI_02057	ODI_02056	Flp pilus assembly protein TadB.	Type II/IV secretion system protein TadC, associated with Flp pilus assembly.	0.910
ODI_02057	ODI_02664	Flp pilus assembly protein TadB.	Type II/IV secretion system protein TadC, associated with Flp pilus assembly.	0.949
ODI_02057	ODI_02986	Flp pilus assembly protein TadB.	Type II/IV secretion system protein TadC, associated with Flp pilus assembly.	0.915
ODI_02411	ODI_01969	General secretion pathway protein F.	General secretion pathway protein F.	0.901
ODI_02664	ODI_02056	Type II/IV secretion system protein TadC, associated with Flp pilus assembly.	Type II/IV secretion system protein TadC, associated with Flp pilus assembly.	0.742
ODI_02664	ODI_02057	Type II/IV secretion system protein TadC, associated with Flp pilus assembly.	Flp pilus assembly protein TadB.	0.949
ODI_02664	ODI_02665	Type II/IV secretion system protein TadC, associated with Flp pilus assembly.	Flp pilus assembly protein TadB.	0.977
ODI_02664	ODI_02987	Type II/IV secretion system protein TadC, associated with Flp pilus assembly.	Flp pilus assembly protein TadB.	0.917
ODI_02665	ODI_02056	Flp pilus assembly protein TadB.	Type II/IV secretion system protein TadC, associated with Flp pilus assembly.	0.799
ODI_02665	ODI_02664	Flp pilus assembly protein TadB.	Type II/IV secretion system protein TadC, associated with Flp pilus assembly.	0.977
ODI_02665	ODI_02986	Flp pilus assembly protein TadB.	Type II/IV secretion system protein TadC, associated with Flp pilus assembly.	0.916
ODI_02986	ODI_02056	Type II/IV secretion system protein TadC, associated with Flp pilus assembly.	Type II/IV secretion system protein TadC, associated with Flp pilus assembly.	0.908
ODI_02986	ODI_02057	Type II/IV secretion system protein TadC, associated with Flp pilus assembly.	Flp pilus assembly protein TadB.	0.915
ODI_02986	ODI_02665	Type II/IV secretion system protein TadC, associated with Flp pilus assembly.	Flp pilus assembly protein TadB.	0.916
ODI_02986	ODI_02987	Type II/IV secretion system protein TadC, associated with Flp pilus assembly.	Flp pilus assembly protein TadB.	0.980