STRINGSTRING
ODI_00041 ODI_00041 ODI_00049 ODI_00049 ODI_00055 ODI_00055 ODI_00095 ODI_00095 ODI_00132 ODI_00132 ODI_00164 ODI_00164 ODI_00185 ODI_00185 dapA dapA ODI_00198 ODI_00198 ODI_00203 ODI_00203 ODI_00228 ODI_00228 ODI_00234 ODI_00234 ODI_00250 ODI_00250 ODI_00292 ODI_00292 ODI_00320 ODI_00320 ODI_00361 ODI_00361 tal tal fumC fumC folD folD ODI_00412 ODI_00412 ODI_00413 ODI_00413 ODI_00414 ODI_00414 ODI_00425 ODI_00425 ODI_00470 ODI_00470 ODI_00471 ODI_00471 ODI_00472 ODI_00472 ODI_00474 ODI_00474 ODI_00505 ODI_00505 ODI_00518 ODI_00518 ODI_00519 ODI_00519 ODI_00521 ODI_00521 fbp fbp ODI_00560 ODI_00560 ODI_00581 ODI_00581 ODI_00582 ODI_00582 ODI_00620 ODI_00620 ODI_00636 ODI_00636 ODI_00637 ODI_00637 ODI_00638 ODI_00638 serC serC ODI_00673 ODI_00673 ODI_00697 ODI_00697 ODI_00705 ODI_00705 eno eno acsA acsA ODI_00739 ODI_00739 accD accD ppc ppc ODI_00879 ODI_00879 ODI_00900 ODI_00900 ODI_00912 ODI_00912 ODI_00919 ODI_00919 ODI_00924 ODI_00924 ubiX ubiX hemA hemA ODI_00960 ODI_00960 ODI_00961 ODI_00961 ODI_01003 ODI_01003 ODI_01016 ODI_01016 ODI_01036 ODI_01036 ODI_01053 ODI_01053 dapF dapF ODI_01119 ODI_01119 ODI_01120 ODI_01120 ODI_01144 ODI_01144 edd edd ODI_01149 ODI_01149 ODI_01213 ODI_01213 ODI_01234 ODI_01234 ODI_01240 ODI_01240 ODI_01292 ODI_01292 ODI_01324 ODI_01324 ODI_01366 ODI_01366 ODI_01367 ODI_01367 ODI_01368 ODI_01368 ODI_01369 ODI_01369 maiA maiA ODI_01371 ODI_01371 ODI_01372 ODI_01372 ODI_01373 ODI_01373 ODI_01405 ODI_01405 ODI_01406 ODI_01406 ODI_01408 ODI_01408 ODI_01422 ODI_01422 ODI_01450 ODI_01450 ODI_01481 ODI_01481 ODI_01485 ODI_01485 ODI_01489 ODI_01489 pgi pgi ODI_01503 ODI_01503 ODI_01511 ODI_01511 prs prs ODI_01527 ODI_01527 ODI_01567 ODI_01567 ODI_01569 ODI_01569 ODI_01592 ODI_01592 ODI_01593 ODI_01593 dapE dapE dapD dapD ODI_01613 ODI_01613 ODI_01631 ODI_01631 dld dld accA accA ODI_01760 ODI_01760 ODI_01804 ODI_01804 ODI_01827 ODI_01827 ODI_01828 ODI_01828 argD argD ODI_01917 ODI_01917 ODI_01921 ODI_01921 ODI_01922 ODI_01922 ODI_01967 ODI_01967 ODI_01968 ODI_01968 ODI_01987 ODI_01987 argD-2 argD-2 thrB thrB ODI_02050 ODI_02050 ODI_02051 ODI_02051 ODI_02052 ODI_02052 ODI_02067 ODI_02067 ODI_02070 ODI_02070 ODI_02071 ODI_02071 hemC hemC sucD sucD sucC sucC ODI_02099 ODI_02099 ODI_02153 ODI_02153 ectC ectC ODI_02155 ODI_02155 ectA ectA ODI_02182 ODI_02182 ODI_02184 ODI_02184 ODI_02207 ODI_02207 ODI_02208 ODI_02208 rhmD rhmD ODI_02244 ODI_02244 ODI_02246 ODI_02246 ODI_02247 ODI_02247 ODI_02248 ODI_02248 ackA ackA pdxH pdxH ODI_02318 ODI_02318 ODI_02323 ODI_02323 tpiA tpiA ODI_02527 ODI_02527 ODI_02530 ODI_02530 ODI_02534 ODI_02534 dapB dapB ODI_02572 ODI_02572 ODI_02583 ODI_02583 ODI_02584 ODI_02584 gltX gltX glyA glyA ODI_02718 ODI_02718 ODI_02754 ODI_02754 ODI_02821 ODI_02821 glcB glcB ODI_02862 ODI_02862 ODI_02878 ODI_02878 ODI_02931 ODI_02931 ODI_02948 ODI_02948 ODI_02949 ODI_02949 ODI_02950 ODI_02950 ODI_02951 ODI_02951 ODI_02953 ODI_02953 ODI_02955 ODI_02955 ODI_02956 ODI_02956 ODI_02957 ODI_02957 ODI_02958 ODI_02958 mdh mdh ODI_02968 ODI_02968 ODI_02971 ODI_02971 ODI_03009 ODI_03009 ODI_03027 ODI_03027 cysG cysG ODI_03058 ODI_03058 ODI_03083 ODI_03083 ODI_03084 ODI_03084 ODI_03119 ODI_03119 ODI_03166 ODI_03166 ODI_03192 ODI_03192 ODI_03202 ODI_03202 ODI_03204 ODI_03204 lysA lysA ODI_03232 ODI_03232 ODI_03239 ODI_03239 ODI_03285 ODI_03285 ODI_03291 ODI_03291 ODI_03344 ODI_03344 ODI_03366 ODI_03366 ODI_03374 ODI_03374 ODI_03381 ODI_03381 ODI_03423 ODI_03423 ODI_03424 ODI_03424 ODI_03439 ODI_03439 hemL hemL ODI_03647 ODI_03647 ODI_03757 ODI_03757 ODI_03758 ODI_03758 ODI_03786 ODI_03786 ODI_03787 ODI_03787 ODI_03798 ODI_03798 pgk pgk ODI_03813 ODI_03813 ODI_03814 ODI_03814 asd asd ODI_03887 ODI_03887 ODI_03892 ODI_03892 ODI_03898 ODI_03898 ODI_03934 ODI_03934 ODI_03938 ODI_03938 ODI_03939 ODI_03939 ODI_03940 ODI_03940 ODI_03954 ODI_03954 ODI_03975 ODI_03975 ODI_03991 ODI_03991 ODI_04067 ODI_04067 rpiA rpiA mqo mqo ODI_04086 ODI_04086 ODI_04087 ODI_04087 ODI_04089 ODI_04089 ODI_04142 ODI_04142 ODI_04144 ODI_04144 ODI_04145 ODI_04145 ODI_04157 ODI_04157 ODI_04199 ODI_04199 ODI_04208 ODI_04208 ODI_04224 ODI_04224 gpmA gpmA ODI_04276 ODI_04276 ODI_04283 ODI_04283 ODI_04326 ODI_04326 ODI_04327 ODI_04327 ODI_04328 ODI_04328 ODI_04329 ODI_04329 ODI_04330 ODI_04330 ODI_04332 ODI_04332 ODI_04334 ODI_04334 ODI_04353 ODI_04353
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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ODI_00041Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (507 aa)
ODI_00049Nitric-oxide reductase, quinol-dependent. (769 aa)
ODI_000552,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family. (261 aa)
ODI_00095S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (375 aa)
ODI_00132Putative hydrolase or acyltransferase. (294 aa)
ODI_00164D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (346 aa)
ODI_00185Amidase; Belongs to the amidase family. (468 aa)
dapA4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (302 aa)
ODI_00198D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (324 aa)
ODI_002034-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. (311 aa)
ODI_00228Assimilatory nitrate reductase large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. (1365 aa)
ODI_00234D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (337 aa)
ODI_00250Demethylmenaquinone methyltransferase. (231 aa)
ODI_00292Allophanate hydrolase. (603 aa)
ODI_00320D-3-phosphoglycerate dehydrogenase. (309 aa)
ODI_00361Hypothetical, related to broad specificity phosphatases COG0406. (219 aa)
talTransaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (319 aa)
fumCFumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (462 aa)
folDMethylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. (289 aa)
ODI_00412Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (903 aa)
ODI_00413Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (565 aa)
ODI_00414Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex. (594 aa)
ODI_00425Thiosulfate sulfurtransferase, rhodanese. (286 aa)
ODI_00470Nitrite reductase [NAD(P)H] large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (851 aa)
ODI_00471Nitrite reductase [NAD(P)H] small subunit. (114 aa)
ODI_00472Uroporphyrinogen-III methyltransferase; Belongs to the precorrin methyltransferase family. (257 aa)
ODI_00474Serine acetyltransferase. (315 aa)
ODI_005051-pyrroline-4-hydroxy-2-carboxylate deaminase; Belongs to the DapA family. (301 aa)
ODI_00518Biotin carboxylase of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (452 aa)
ODI_00519Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (250 aa)
ODI_00521D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (334 aa)
fbpFructose-1,6-bisphosphatase, type I; Belongs to the FBPase class 1 family. (338 aa)
ODI_00560Glycolate dehydrogenase, subunit GlcD. (499 aa)
ODI_00581Threonine synthase. (471 aa)
ODI_00582Homoserine dehydrogenase. (435 aa)
ODI_00620Sulfite reductase [NADPH] hemoprotein beta-component. (580 aa)
ODI_00636Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. (436 aa)
ODI_00637Sulfate adenylyltransferase subunit 2. (302 aa)
ODI_00638Phosphoadenylyl-sulfate reductase [thioredoxin]; Reduction of activated sulfate into sulfite. (256 aa)
serCPhosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. (380 aa)
ODI_00673Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases. (277 aa)
ODI_006972-keto-4-pentenoate hydratase. (272 aa)
ODI_00705Acetyl-coenzyme A synthetase. (564 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (428 aa)
acsAAcetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (659 aa)
ODI_00739D-3-phosphoglycerate dehydrogenase. (322 aa)
accDAcetyl-coenzyme A carboxyl transferase beta chain; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (293 aa)
ppcPhosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. (953 aa)
ODI_00879Gamma-glutamyltranspeptidase. (535 aa)
ODI_00900Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (258 aa)
ODI_00912Citrate synthase (si). (266 aa)
ODI_009193-oxoacyl-[acyl-carrier protein] reductase. (259 aa)
ODI_009243-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
ubiX3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (197 aa)
hemAGlutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (424 aa)
ODI_00960Polysaccharide deacetylase family protein. (316 aa)
ODI_00961Amidase. (415 aa)
ODI_01003Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (244 aa)
ODI_01016Aldehyde dehydrogenase B; Belongs to the aldehyde dehydrogenase family. (494 aa)
ODI_01036Mandelate racemase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (390 aa)
ODI_010535,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. (286 aa)
dapFDiaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (299 aa)
ODI_011193-ketoacyl-CoA thiolase @ Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (399 aa)
ODI_01120Enoyl-CoA hydratase / 3,2-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase. (818 aa)
ODI_011444-Hydroxy-2-oxoglutarate aldolase @ 2-dehydro-3-deoxyphosphogluconate aldolase. (196 aa)
eddPhosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (602 aa)
ODI_01149Gluconokinase. (195 aa)
ODI_01213NAD-specific glutamate dehydrogenase; NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (429 aa)
ODI_01234Aldo-keto reductase. (287 aa)
ODI_01240Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (776 aa)
ODI_01292D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (351 aa)
ODI_01324Hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (327 aa)
ODI_01366Isoquinoline 1-oxidoreductase beta subunit. (776 aa)
ODI_01367N-carbamoylsarcosine amidase. (226 aa)
ODI_01368Leucyl aminopeptidase (aminopeptidase T). (361 aa)
ODI_01369Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase. (275 aa)
maiAMaleate cis-trans isomerase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate. (255 aa)
ODI_01371Salicylate hydroxylase. (387 aa)
ODI_01372Isoquinoline 1-oxidoreductase alpha subunit. (180 aa)
ODI_01373Putative diheme cytochrome c-553. (998 aa)
ODI_01405Respiratory nitrate reductase alpha chain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1265 aa)
ODI_01406Respiratory nitrate reductase beta chain. (507 aa)
ODI_01408Respiratory nitrate reductase gamma chain. (245 aa)
ODI_01422Urea carboxylase without Allophanate hydrolase 2 domains. (575 aa)
ODI_014502,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.n4); Belongs to the HpcH/HpaI aldolase family. (268 aa)
ODI_01481MaoC family protein. (135 aa)
ODI_01485Phosphate acetyltransferase. (142 aa)
ODI_01489Amidase; Belongs to the amidase family. (394 aa)
pgiGlucose-6-phosphate isomerase; Belongs to the GPI family. (524 aa)
ODI_01503Phosphomannomutase. (461 aa)
ODI_01511Thiosulfate sulfurtransferase, rhodanese. (417 aa)
prsRibose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. (316 aa)
ODI_01527N-ethylmaleimide reductase. (296 aa)
ODI_01567Acetyl-CoA hydrolase. (511 aa)
ODI_01569Nitrilase. (333 aa)
ODI_01592D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (318 aa)
ODI_01593Fumarylacetoacetate hydrolase family protein. (299 aa)
dapEN-succinyl-L,L-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. (379 aa)
dapD2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family. (273 aa)
ODI_01613N-succinyl-L,L-diaminopimelate aminotransferase alternative. (398 aa)
ODI_016315,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. (272 aa)
dldD-Lactate dehydrogenase; Catalyzes the oxidation of D-lactate to pyruvate. Belongs to the quinone-dependent D-lactate dehydrogenase family. (578 aa)
accAAcetyl-coenzyme A carboxyl transferase alpha chain; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (321 aa)
ODI_01760Aspartokinase; Belongs to the aspartokinase family. (409 aa)
ODI_01804Glycolate dehydrogenase, iron-sulfur subunit GlcF. (415 aa)
ODI_01827Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (499 aa)
ODI_018284-carboxymuconolactone decarboxylase. (130 aa)
argDAcetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (393 aa)
ODI_01917Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (477 aa)
ODI_01921Transketolase, N-terminal section. (299 aa)
ODI_01922Transketolase, C-terminal section. (334 aa)
ODI_01967Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase. (699 aa)
ODI_019683-ketoacyl-CoA thiolase @ Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (433 aa)
ODI_019872-ketoglutaric semialdehyde dehydrogenase. (480 aa)
argD-2Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (395 aa)
thrBHomoserine kinase; Belongs to the pseudomonas-type ThrB family. (322 aa)
ODI_02050Periplasmic aromatic aldehyde oxidoreductase, molybdenum binding subunit YagR. (724 aa)
ODI_02051Periplasmic aromatic aldehyde oxidoreductase, FAD binding subunit YagS. (338 aa)
ODI_02052Periplasmic aromatic aldehyde oxidoreductase, iron-sulfur subunit YagT. (188 aa)
ODI_02067Fumarylacetoacetase. (231 aa)
ODI_02070Homolog of E. coli HemX protein. (428 aa)
ODI_02071Uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. (267 aa)
hemCPorphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. (292 aa)
sucDSuccinyl-CoA ligase [ADP-forming] alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (293 aa)
sucCSuccinyl-CoA ligase [ADP-forming] beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (386 aa)
ODI_02099Putative amidase. (495 aa)
ODI_02153Ectoine hydroxylase. (307 aa)
ectCL-ectoine synthase; Catalyzes the circularization of gamma-N-acetyl-alpha,gamma- diaminobutyric acid (ADABA) to ectoine (1,4,5,6-tetrahydro-2-methyl-4- pyrimidine carboxylic acid), which is an excellent osmoprotectant. (124 aa)
ODI_02155Diaminobutyrate-pyruvate aminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (436 aa)
ectAL-2,4-diaminobutyric acid acetyltransferase; Catalyzes the acetylation of L-2,4-diaminobutyrate (DABA) to gamma-N-acetyl-alpha,gamma-diaminobutyric acid (ADABA) with acetyl coenzyme A. (177 aa)
ODI_02182Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (500 aa)
ODI_021843-carboxy-cis,cis-muconate cycloisomerase. (439 aa)
ODI_02207Aldehyde dehydrogenase A; Belongs to the aldehyde dehydrogenase family. (478 aa)
ODI_022082,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.n4); Belongs to the HpcH/HpaI aldolase family. (267 aa)
rhmDGluconate dehydratase; Catalyzes the dehydration of L-rhamnonate to 2-keto-3-deoxy- L-rhamnonate (KDR). (395 aa)
ODI_02244NAD-dependent formate dehydrogenase delta subunit. (82 aa)
ODI_02246NAD-dependent formate dehydrogenase alpha subunit. (958 aa)
ODI_02247NAD-dependent formate dehydrogenase beta subunit. (534 aa)
ODI_02248NAD-dependent formate dehydrogenase gamma subunit. (190 aa)
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (411 aa)
pdxHPyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). (210 aa)
ODI_02318Phosphoserine phosphatase. (285 aa)
ODI_02323Gluconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (399 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (252 aa)
ODI_02527Isocitrate dehydrogenase [NADP]. (418 aa)
ODI_02530Galactonate dehydratase. (382 aa)
ODI_02534Isocitrate dehydrogenase [NADP]; Monomeric isocitrate dehydrogenase [NADP]; Belongs to the monomeric-type IDH family. (742 aa)
dapB4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (262 aa)
ODI_02572D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (329 aa)
ODI_02583Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (151 aa)
ODI_02584Biotin carboxylase of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (448 aa)
gltXGlutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. (465 aa)
glyASerine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (414 aa)
ODI_02718Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (508 aa)
ODI_02754Serine acetyltransferase. (327 aa)
ODI_02821Nucleoside-diphosphate-sugar epimerases. (506 aa)
glcBMalate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. (724 aa)
ODI_02862Isocitrate lyase. (443 aa)
ODI_028783-ketoacyl-CoA thiolase @ Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
ODI_02931Acetoacetyl-CoA reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (245 aa)
ODI_02948Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase. (475 aa)
ODI_02949Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (407 aa)
ODI_029502-oxoglutarate dehydrogenase E1 component. (955 aa)
ODI_02951NADP-dependent malic enzyme. (763 aa)
ODI_02953Citrate synthase (si); Belongs to the citrate synthase family. (433 aa)
ODI_02955Succinate dehydrogenase iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (232 aa)
ODI_02956Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (592 aa)
ODI_02957Succinate dehydrogenase hydrophobic membrane anchor protein. (127 aa)
ODI_02958Succinate dehydrogenase cytochrome b-556 subunit. (117 aa)
mdhMalate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. (329 aa)
ODI_02968Aconitate hydratase 2; Belongs to the aconitase/IPM isomerase family. (863 aa)
ODI_02971Aconitate hydratase @ 2-methylisocitrate dehydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (902 aa)
ODI_03009Thiosulfate sulfurtransferase, rhodanese. (308 aa)
ODI_03027Copper-containing nitrite reductase; Belongs to the multicopper oxidase family. (361 aa)
cysGUroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. (466 aa)
ODI_03058Ectoine hydroxylase. (290 aa)
ODI_03083Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (157 aa)
ODI_03084Biotin carboxylase of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (452 aa)
ODI_03119NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (448 aa)
ODI_03166Gluconolactonase. (349 aa)
ODI_03192Isocitrate lyase. (287 aa)
ODI_03202Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (923 aa)
ODI_03204Acylphosphate phosphohydrolase, putative. (98 aa)
lysADiaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (431 aa)
ODI_03232Dienelactone hydrolase family. (230 aa)
ODI_03239Porphobilinogen synthase; Belongs to the ALAD family. (340 aa)
ODI_03285Low-specificity L-threonine aldolase. (361 aa)
ODI_03291Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (491 aa)
ODI_03344Acetoacetyl-CoA reductase. (246 aa)
ODI_03366Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (505 aa)
ODI_03374Aldose epimerase family protein. (302 aa)
ODI_03381Dienelactone hydrolase family. (297 aa)
ODI_03423Uricase (urate oxidase). (320 aa)
ODI_03424Hydantoin racemase. (241 aa)
ODI_03439D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (306 aa)
hemLGlutamate-1-semialdehyde aminotransferase. (425 aa)
ODI_03647Glutaryl-CoA dehydrogenase. (398 aa)
ODI_03757Formate dehydrogenase N gamma subunit. (220 aa)
ODI_03758Formate dehydrogenase O beta subunit. (308 aa)
ODI_03786Glycerate kinase; Belongs to the glycerate kinase type-1 family. (380 aa)
ODI_03787Pyruvate kinase; Belongs to the pyruvate kinase family. (479 aa)
ODI_03798Fructose-bisphosphate aldolase class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. (354 aa)
pgkPhosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (397 aa)
ODI_03813NAD-dependent glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (336 aa)
ODI_03814Transketolase; Belongs to the transketolase family. (662 aa)
asdAspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (377 aa)
ODI_03887Demethylmenaquinone methyltransferase. (226 aa)
ODI_03892Arylmalonate decarboxylase. (243 aa)
ODI_03898Desferrioxamine E biosynthesis protein DesB @ Siderophore biosynthesis protein, monooxygenase. (442 aa)
ODI_03934Aldose 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family. (302 aa)
ODI_03938Periplasmic aromatic aldehyde oxidoreductase, iron-sulfur subunit YagT. (170 aa)
ODI_03939Periplasmic aromatic aldehyde oxidoreductase, FAD binding subunit YagS. (339 aa)
ODI_03940Periplasmic aromatic aldehyde oxidoreductase, molybdenum binding subunit YagR. (741 aa)
ODI_03954Siderophore [Alcaligin] biosynthetic enzyme @ Siderophore biosynthesis protein, monooxygenase. (452 aa)
ODI_03975Diaminopimelate decarboxylase. (521 aa)
ODI_03991Dihydrolipoamide dehydrogenase. (477 aa)
ODI_040673-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
rpiARibose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. (226 aa)
mqoMalate:quinone oxidoreductase. (576 aa)
ODI_04086Glutamate synthase [NADPH] small chain. (488 aa)
ODI_04087Glutamate synthase [NADPH] large chain. (1580 aa)
ODI_04089S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. (281 aa)
ODI_04142Gluconolactonase. (330 aa)
ODI_04144D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (312 aa)
ODI_04145Demethylmenaquinone methyltransferase. (228 aa)
ODI_041574-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. (301 aa)
ODI_04199Similar to ribulose-1,5-bisphosphate carboxylase, Type III; Belongs to the RuBisCO large chain family. (432 aa)
ODI_04208Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (478 aa)
ODI_04224Phenylacetate-coenzyme A ligase. (423 aa)
gpmAPhosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (250 aa)
ODI_042763-hydroxybutyryl-CoA dehydrogenase. (321 aa)
ODI_04283Hypothetical oxidoreductase, YbiC homolog; Belongs to the LDH2/MDH2 oxidoreductase family. (361 aa)
ODI_04326Carbon monoxide dehydrogenase large chain. (977 aa)
ODI_04327Carbon monoxide dehydrogenase medium chain. (280 aa)
ODI_04328Xanthine dehydrogenase iron-sulfur subunit. (173 aa)
ODI_04329Long-chain-fatty-acid--CoA ligase. (528 aa)
ODI_043303-polyprenyl-4-hydroxybenzoate carboxy-lyase; Belongs to the UbiD family. (477 aa)
ODI_04332Enoyl-CoA hydratase. (268 aa)
ODI_04334Choline dehydrogenase. (564 aa)
ODI_04353D-3-phosphoglycerate dehydrogenase. (399 aa)
Your Current Organism:
Orrella dioscoreae
NCBI taxonomy Id: 1851544
Other names: Alcaligenaceae bacterium LMG 29303, CIP 111009, LMG 29303, LMG:29303, O. dioscoreae
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