(12 nodes) Mixed, incl. Protocatechuate 3,4-dioxygenase activity, and Adenylosuccinate lyase C-terminal network (Pseudomonas silesiensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANJ54633.1	Protocatechuate 3,4-dioxygenase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (234 aa)
	ANJ54634.1	Protocatechuate 3,4-dioxygenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa)
	ANJ54636.1	3-carboxy-cis,cis-muconate cycloisomerase; Catalyzes the cycloisomerization of cis,cis-muconate; Derived by automated computational analysis using gene prediction method: Protein Homology. (454 aa)
	ANJ54637.1	3-oxoadipate enol-lactonase; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
	ANJ59273.1	4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)
	ANJ55430.1	Protocatechuate 3,4-dioxygenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (200 aa)
	ANJ55431.1	Protocatechuate 3,4-dioxygenase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
	ANJ55477.1	3-carboxy-cis,cis-muconate cycloisomerase; Catalyzes the cycloisomerization of cis,cis-muconate; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)
	ANJ55691.1	4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (129 aa)
	ANJ57030.1	Catalyzes the formation of protocatechuate from 4-hydroxybenzoate; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa)
	ANJ57712.1	3-oxoadipate enol-lactonase; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa)
	ANJ58295.1	4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa)

Your Current Organism:

Pseudomonas silesiensis

NCBI taxonomy Id: 1853130
Other names: DSM 103370, P. silesiensis, PCM 2856, Pseudomonas silesiensis Kaminski et al. 2018, Pseudomonas sp. A3(2016), strain A3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANJ54633.1	ANJ54634.1	PMA3_05400	PMA3_05405	Protocatechuate 3,4-dioxygenase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protocatechuate 3,4-dioxygenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
ANJ54633.1	ANJ54636.1	PMA3_05400	PMA3_05415	Protocatechuate 3,4-dioxygenase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-carboxy-cis,cis-muconate cycloisomerase; Catalyzes the cycloisomerization of cis,cis-muconate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
ANJ54633.1	ANJ54637.1	PMA3_05400	PMA3_05420	Protocatechuate 3,4-dioxygenase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoadipate enol-lactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.811
ANJ54633.1	ANJ55430.1	PMA3_05400	PMA3_09855	Protocatechuate 3,4-dioxygenase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protocatechuate 3,4-dioxygenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.823
ANJ54633.1	ANJ55477.1	PMA3_05400	PMA3_10115	Protocatechuate 3,4-dioxygenase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-carboxy-cis,cis-muconate cycloisomerase; Catalyzes the cycloisomerization of cis,cis-muconate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.958
ANJ54633.1	ANJ55691.1	PMA3_05400	PMA3_11240	Protocatechuate 3,4-dioxygenase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.701
ANJ54633.1	ANJ57030.1	PMA3_05400	PMA3_18500	Protocatechuate 3,4-dioxygenase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	Catalyzes the formation of protocatechuate from 4-hydroxybenzoate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
ANJ54633.1	ANJ58295.1	PMA3_05400	PMA3_25215	Protocatechuate 3,4-dioxygenase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.691
ANJ54633.1	ANJ59273.1	PMA3_05400	PMA3_05425	Protocatechuate 3,4-dioxygenase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.884
ANJ54634.1	ANJ54633.1	PMA3_05405	PMA3_05400	Protocatechuate 3,4-dioxygenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protocatechuate 3,4-dioxygenase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
ANJ54634.1	ANJ54636.1	PMA3_05405	PMA3_05415	Protocatechuate 3,4-dioxygenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-carboxy-cis,cis-muconate cycloisomerase; Catalyzes the cycloisomerization of cis,cis-muconate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.983
ANJ54634.1	ANJ54637.1	PMA3_05405	PMA3_05420	Protocatechuate 3,4-dioxygenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoadipate enol-lactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.789
ANJ54634.1	ANJ55431.1	PMA3_05405	PMA3_09860	Protocatechuate 3,4-dioxygenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protocatechuate 3,4-dioxygenase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.840
ANJ54634.1	ANJ55477.1	PMA3_05405	PMA3_10115	Protocatechuate 3,4-dioxygenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-carboxy-cis,cis-muconate cycloisomerase; Catalyzes the cycloisomerization of cis,cis-muconate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
ANJ54634.1	ANJ55691.1	PMA3_05405	PMA3_11240	Protocatechuate 3,4-dioxygenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.641
ANJ54634.1	ANJ57030.1	PMA3_05405	PMA3_18500	Protocatechuate 3,4-dioxygenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Catalyzes the formation of protocatechuate from 4-hydroxybenzoate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
ANJ54634.1	ANJ58295.1	PMA3_05405	PMA3_25215	Protocatechuate 3,4-dioxygenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.628
ANJ54634.1	ANJ59273.1	PMA3_05405	PMA3_05425	Protocatechuate 3,4-dioxygenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.867
ANJ54636.1	ANJ54633.1	PMA3_05415	PMA3_05400	3-carboxy-cis,cis-muconate cycloisomerase; Catalyzes the cycloisomerization of cis,cis-muconate; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protocatechuate 3,4-dioxygenase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
ANJ54636.1	ANJ54634.1	PMA3_05415	PMA3_05405	3-carboxy-cis,cis-muconate cycloisomerase; Catalyzes the cycloisomerization of cis,cis-muconate; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protocatechuate 3,4-dioxygenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.983