STRINGSTRING
ANJ54344.1 ANJ54344.1 rsmC rsmC ANJ54903.1 ANJ54903.1 ANJ54904.1 ANJ54904.1 ANJ54905.1 ANJ54905.1 ANJ54906.1 ANJ54906.1 ANJ54907.1 ANJ54907.1 ANJ54908.1 ANJ54908.1 ANJ55058.1 ANJ55058.1 ANJ57208.1 ANJ57208.1 ANJ57209.1 ANJ57209.1 ANJ57210.1 ANJ57210.1 ANJ57211.1 ANJ57211.1 ANJ59414.1 ANJ59414.1 ANJ57212.1 ANJ57212.1 ANJ57213.1 ANJ57213.1 ANJ57214.1 ANJ57214.1 ANJ57215.1 ANJ57215.1 ANJ57216.1 ANJ57216.1 nudJ nudJ mnmA mnmA hflD hflD ANJ57236.1 ANJ57236.1 ANJ57237.1 ANJ57237.1 ANJ57750.1 ANJ57750.1 rnt rnt ANJ58018.1 ANJ58018.1 ANJ58226.1 ANJ58226.1 ANJ58230.1 ANJ58230.1 ANJ58231.1 ANJ58231.1 ANJ58258.1 ANJ58258.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ANJ54344.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa)
rsmC16S rRNA methyltransferase; Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle; Belongs to the methyltransferase superfamily. RsmC family. (332 aa)
ANJ54903.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (173 aa)
ANJ54904.1BolA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BolA/IbaG family. (99 aa)
ANJ54905.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (61 aa)
ANJ54906.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0176 family. (313 aa)
ANJ54907.1Disulfide bond formation protein DsbA; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa)
ANJ54908.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (605 aa)
ANJ55058.1RNA pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
ANJ57208.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (116 aa)
ANJ57209.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (82 aa)
ANJ57210.1DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (109 aa)
ANJ57211.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (234 aa)
ANJ59414.1tRNA 2-thiouridine(34) synthase TusD; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)
ANJ57212.1tRNA 2-thiouridine(34) synthase TusC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DsrF/TusC family. (120 aa)
ANJ57213.1Sulfur relay protein DsrH; Derived by automated computational analysis using gene prediction method: Protein Homology. (97 aa)
ANJ57214.1Sulfur relay protein TusE; Part of a sulfur-relay system. (111 aa)
ANJ57215.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
ANJ57216.1Glutathione-dependent reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
nudJNUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family. NudJ subfamily. (148 aa)
mnmAtRNA 2-thiouridine(34) synthase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. (381 aa)
hflDDNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (207 aa)
ANJ57236.1Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)
ANJ57237.1GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (141 aa)
ANJ57750.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (97 aa)
rntRibonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis. (225 aa)
ANJ58018.1Monothiol glutaredoxin, Grx4 family; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaredoxin family. Monothiol subfamily. (113 aa)
ANJ58226.1Helix-turn-helix-type transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (319 aa)
ANJ58230.1Cell division protein DedD; Derived by automated computational analysis using gene prediction method: Protein Homology. (98 aa)
ANJ58231.1HopJ type III effector protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa)
ANJ58258.1BolA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BolA/IbaG family. (79 aa)
Your Current Organism:
Pseudomonas silesiensis
NCBI taxonomy Id: 1853130
Other names: DSM 103370, P. silesiensis, PCM 2856, Pseudomonas silesiensis Kaminski et al. 2018, Pseudomonas sp. A3(2016), strain A3
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