(24 nodes) Mixed, incl. Siroheme decarboxylase , AsnC-like ligand binding domain, and Oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor network (Pseudomonas silesiensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANJ56175.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (673 aa)
	ANJ59357.1	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
	ANJ56176.1	Nitric oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (456 aa)
	ANJ56177.1	Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
	ANJ56614.1	Nitric oxide reductase activation protein NorD; Derived by automated computational analysis using gene prediction method: Protein Homology. (613 aa)
	ANJ56615.1	Nitric oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. (476 aa)
	ANJ56616.1	Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa)
	ANJ56618.1	Cytochrome-c oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (195 aa)
	ANJ56619.1	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
	ANJ56620.1	Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (562 aa)
	ANJ56622.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (108 aa)
	ANJ56623.1	Protein nirF; Derived by automated computational analysis using gene prediction method: Protein Homology. (392 aa)
	ANJ56624.1	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (152 aa)
	ANJ56625.1	Protein nirL; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa)
	ANJ56626.1	Protein nirG; Derived by automated computational analysis using gene prediction method: Protein Homology. (147 aa)
	ANJ56627.1	Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)
	ANJ56628.1	Heme d1 biosynthesis radical SAM protein NirJ; Derived by automated computational analysis using gene prediction method: Protein Homology. (392 aa)
	ANJ56630.1	Cytochrome C oxidase Cbb3; Derived by automated computational analysis using gene prediction method: Protein Homology. (497 aa)
	ANJ56632.1	NosL protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (175 aa)
	ANJ56633.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
	ANJ56634.1	Copper ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
	ANJ56635.1	Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (430 aa)
	nosZ	TAT-dependent nitrous-oxide reductase; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family. (636 aa)
	ANJ56637.1	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (756 aa)

Your Current Organism:

Pseudomonas silesiensis

NCBI taxonomy Id: 1853130
Other names: DSM 103370, P. silesiensis, PCM 2856, Pseudomonas silesiensis Kaminski et al. 2018, Pseudomonas sp. A3(2016), strain A3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANJ56175.1	ANJ56176.1	PMA3_13910	PMA3_13920	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitric oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.973
ANJ56175.1	ANJ56177.1	PMA3_13910	PMA3_13925	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
ANJ56175.1	ANJ56615.1	PMA3_13910	PMA3_16280	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitric oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.	0.908
ANJ56175.1	ANJ56616.1	PMA3_13910	PMA3_16285	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.921
ANJ56175.1	ANJ56618.1	PMA3_13910	PMA3_16295	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome-c oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.432
ANJ56175.1	ANJ56619.1	PMA3_13910	PMA3_16300	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.893
ANJ56175.1	ANJ56620.1	PMA3_13910	PMA3_16305	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.430
ANJ56175.1	ANJ56623.1	PMA3_13910	PMA3_16320	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protein nirF; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.441
ANJ56175.1	ANJ56630.1	PMA3_13910	PMA3_16355	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome C oxidase Cbb3; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.554
ANJ56175.1	ANJ56632.1	PMA3_13910	PMA3_16365	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	NosL protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.667
ANJ56175.1	ANJ56633.1	PMA3_13910	PMA3_16370	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.669
ANJ56175.1	ANJ56635.1	PMA3_13910	PMA3_16380	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.719
ANJ56175.1	ANJ56637.1	PMA3_13910	PMA3_16390	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.841
ANJ56175.1	ANJ59357.1	PMA3_13910	PMA3_13915	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.974
ANJ56175.1	nosZ	PMA3_13910	PMA3_16385	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	TAT-dependent nitrous-oxide reductase; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family.	0.682
ANJ56176.1	ANJ56175.1	PMA3_13920	PMA3_13910	Nitric oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.973
ANJ56176.1	ANJ56177.1	PMA3_13920	PMA3_13925	Nitric oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
ANJ56176.1	ANJ56614.1	PMA3_13920	PMA3_16275	Nitric oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitric oxide reductase activation protein NorD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.909
ANJ56176.1	ANJ56615.1	PMA3_13920	PMA3_16280	Nitric oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitric oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.	0.908
ANJ56176.1	ANJ56616.1	PMA3_13920	PMA3_16285	Nitric oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998