(55 nodes) Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides network (Pseudomonas silesiensis)

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experimentally determined

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Your Input:
	ANJ54555.1	Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family. (166 aa)
	ANJ54592.1	Acyl-homoserine lactone acylase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (816 aa)
	astE	Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. (336 aa)
	ANJ55080.1	Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (196 aa)
	ANJ55137.1	Carbon-nitrogen hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (376 aa)
	ANJ55328.1	L-asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the asparaginase 1 family. (362 aa)
	ANJ55591.1	Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
	purU	Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). (288 aa)
	purU-2	Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). (288 aa)
	ANJ55927.1	Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)
	ANJ55929.1	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)
	ANJ56027.1	Acyl-homoserine lactone acylase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (780 aa)
	ANJ56088.1	Chemotaxis protein CheB; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa)
	ANJ56159.1	Ompetence-damaged protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family. (173 aa)
	ANJ56239.1	Acetylpolyamine aminohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)
	ANJ56311.1	Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
	ANJ56364.1	Acetylglucosaminylphosphatidylinositol deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
	ANJ56661.1	Gamma-glutamyl-gamma-aminobutyrate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
	ANJ56725.1	Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)
	ANJ56822.1	Acetamidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (444 aa)
	ANJ56961.1	Chloramphenicol resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (191 aa)
	PMA3_19460	Sterol desaturase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (190 aa)
	cheB-2	Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (381 aa)
	ANJ57645.1	Flagellar rod assembly protein/muramidase FlgJ; Derived by automated computational analysis using gene prediction method: Protein Homology. (436 aa)
	def	Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. (179 aa)
	purU-3	Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). (282 aa)
	ANJ58091.1	Carbon-nitrogen hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
	ANJ58220.1	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
	ANJ58282.1	Carbon-nitrogen hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
	ANJ58336.1	N-acetyl-anhydromuranmyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (186 aa)
	ANJ58481.1	Gamma-glutamyl-gamma-aminobutyrate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
	ANJ58682.1	Histidine triad nucleotide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (114 aa)
	purU-4	Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). (285 aa)
	ANJ58952.1	Penicillin amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (803 aa)
	ANJ58962.1	Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa)
	ANJ58976.1	Acetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. (386 aa)
	ANJ59130.1	L-asparaginase 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)
	ANJ59132.1	Acetylpolyamine aminohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)
	ANJ59235.1	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
	def-2	Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. (168 aa)
	hisH	Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. (212 aa)
	ANJ53854.1	N-formylglutamate deformylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
	ANJ53954.1	GlcNAc-PI de-N-acetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (476 aa)
	ANJ53995.1	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (475 aa)
	nadE	NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. (275 aa)
	ureC	Urease subunit alpha; Ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; Derived by automated computational analysis using gene prediction method: Protein Homology. (566 aa)
	ureB	Urease subunit beta; Ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem [...] (101 aa)
	ureA	Urease subunit gamma; UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the urease gamma subunit family. (100 aa)
	ANJ54143.1	Acetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. (387 aa)
	ANJ54161.1	Histone deacetylase superfamily protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
	ANJ54361.1	L-asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)
	lpxC	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. (303 aa)
	cheB	Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (336 aa)
	dapE	Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. (383 aa)
	pyrG	tRNA(Ile)-lysidine synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. (543 aa)

Your Current Organism:

Pseudomonas silesiensis

NCBI taxonomy Id: 1853130
Other names: DSM 103370, P. silesiensis, PCM 2856, Pseudomonas silesiensis Kaminski et al. 2018, Pseudomonas sp. A3(2016), strain A3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANJ53854.1	ANJ54361.1	PMA3_01305	PMA3_03995	N-formylglutamate deformylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	L-asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.800
ANJ53854.1	ANJ55328.1	PMA3_01305	PMA3_09280	N-formylglutamate deformylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	L-asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the asparaginase 1 family.	0.800
ANJ53854.1	ANJ59130.1	PMA3_01305	PMA3_29745	N-formylglutamate deformylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	L-asparaginase 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.800
ANJ53995.1	ANJ57645.1	PMA3_02045	PMA3_21775	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar rod assembly protein/muramidase FlgJ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.493
ANJ53995.1	ANJ58220.1	PMA3_02045	PMA3_24835	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.419
ANJ53995.1	ANJ58336.1	PMA3_02045	PMA3_25430	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	N-acetyl-anhydromuranmyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.419
ANJ53995.1	ANJ59235.1	PMA3_02045	PMA3_30300	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.419
ANJ54143.1	ANJ58976.1	PMA3_02810	PMA3_28945	Acetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.921
ANJ54361.1	ANJ53854.1	PMA3_03995	PMA3_01305	L-asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology.	N-formylglutamate deformylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.800
ANJ54361.1	ANJ55328.1	PMA3_03995	PMA3_09280	L-asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology.	L-asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the asparaginase 1 family.	0.926
ANJ54361.1	ANJ59130.1	PMA3_03995	PMA3_29745	L-asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology.	L-asparaginase 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.951
ANJ54555.1	ANJ56159.1	PMA3_04990	PMA3_13815	Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.	Ompetence-damaged protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.	0.920
ANJ55080.1	ANJ55927.1	PMA3_07860	PMA3_12550	Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.686
ANJ55080.1	ANJ56725.1	PMA3_07860	PMA3_16840	Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.762
ANJ55080.1	ANJ56961.1	PMA3_07860	PMA3_18120	Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chloramphenicol resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.703
ANJ55328.1	ANJ53854.1	PMA3_09280	PMA3_01305	L-asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the asparaginase 1 family.	N-formylglutamate deformylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.800
ANJ55328.1	ANJ54361.1	PMA3_09280	PMA3_03995	L-asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the asparaginase 1 family.	L-asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
ANJ55328.1	ANJ59130.1	PMA3_09280	PMA3_29745	L-asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the asparaginase 1 family.	L-asparaginase 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.944
ANJ55328.1	astE	PMA3_09280	PMA3_05650	L-asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the asparaginase 1 family.	Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily.	0.800
ANJ55927.1	ANJ55080.1	PMA3_12550	PMA3_07860	Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.686