(9 nodes) Beta-ketoadipate pathway network (Pseudomonas silesiensis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANJ55635.1	Catechol 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)
	ANJ54630.1	3-oxoadipate--succinyl-CoA transferase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)
	ANJ54631.1	3-oxoadipate--succinyl-CoA transferase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
	ANJ54637.1	3-oxoadipate enol-lactonase; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
	ANJ55797.1	Ketoacid CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
	ANJ59327.1	CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)
	ANJ55634.1	Muconolactone delta-isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the muconolactone Delta-isomerase family. (96 aa)
	ANJ56826.1	succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)
	ANJ56825.1	succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)

Your Current Organism:

Pseudomonas silesiensis

NCBI taxonomy Id: 1853130
Other names: DSM 103370, P. silesiensis, PCM 2856, Pseudomonas silesiensis Kaminski et al. 2018, Pseudomonas sp. A3(2016), strain A3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANJ54630.1	ANJ54631.1	PMA3_05385	PMA3_05390	3-oxoadipate--succinyl-CoA transferase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoadipate--succinyl-CoA transferase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
ANJ54630.1	ANJ54637.1	PMA3_05385	PMA3_05420	3-oxoadipate--succinyl-CoA transferase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoadipate enol-lactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.692
ANJ54630.1	ANJ55635.1	PMA3_05385	PMA3_10960	3-oxoadipate--succinyl-CoA transferase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.	Catechol 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.482
ANJ54630.1	ANJ55797.1	PMA3_05385	PMA3_11810	3-oxoadipate--succinyl-CoA transferase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ketoacid CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
ANJ54630.1	ANJ56826.1	PMA3_05385	PMA3_17405	3-oxoadipate--succinyl-CoA transferase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.	succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.889
ANJ54630.1	ANJ59327.1	PMA3_05385	PMA3_11805	3-oxoadipate--succinyl-CoA transferase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.	CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.918
ANJ54631.1	ANJ54630.1	PMA3_05390	PMA3_05385	3-oxoadipate--succinyl-CoA transferase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoadipate--succinyl-CoA transferase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
ANJ54631.1	ANJ54637.1	PMA3_05390	PMA3_05420	3-oxoadipate--succinyl-CoA transferase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoadipate enol-lactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.695
ANJ54631.1	ANJ55635.1	PMA3_05390	PMA3_10960	3-oxoadipate--succinyl-CoA transferase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.	Catechol 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.496
ANJ54631.1	ANJ55797.1	PMA3_05390	PMA3_11810	3-oxoadipate--succinyl-CoA transferase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ketoacid CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.921
ANJ54631.1	ANJ56825.1	PMA3_05390	PMA3_17400	3-oxoadipate--succinyl-CoA transferase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.	succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.772
ANJ54631.1	ANJ59327.1	PMA3_05390	PMA3_11805	3-oxoadipate--succinyl-CoA transferase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.	CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
ANJ54637.1	ANJ54630.1	PMA3_05420	PMA3_05385	3-oxoadipate enol-lactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoadipate--succinyl-CoA transferase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.692
ANJ54637.1	ANJ54631.1	PMA3_05420	PMA3_05390	3-oxoadipate enol-lactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoadipate--succinyl-CoA transferase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.695
ANJ54637.1	ANJ55634.1	PMA3_05420	PMA3_10955	3-oxoadipate enol-lactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Muconolactone delta-isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the muconolactone Delta-isomerase family.	0.956
ANJ54637.1	ANJ55635.1	PMA3_05420	PMA3_10960	3-oxoadipate enol-lactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Catechol 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.726
ANJ55634.1	ANJ54637.1	PMA3_10955	PMA3_05420	Muconolactone delta-isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the muconolactone Delta-isomerase family.	3-oxoadipate enol-lactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
ANJ55634.1	ANJ55635.1	PMA3_10955	PMA3_10960	Muconolactone delta-isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the muconolactone Delta-isomerase family.	Catechol 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
ANJ55634.1	ANJ56826.1	PMA3_10955	PMA3_17405	Muconolactone delta-isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the muconolactone Delta-isomerase family.	succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.442
ANJ55635.1	ANJ54630.1	PMA3_10960	PMA3_05385	Catechol 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoadipate--succinyl-CoA transferase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.482