9 items (Pseudomonas silesiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANJ58777.1	Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family. (1005 aa)
	ANJ55653.1	Sarcosine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (192 aa)
	ANJ55654.1	Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family. (965 aa)
	mnmE	tRNA modification GTPase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (456 aa)
	ANJ55667.1	Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family. (780 aa)
	ANJ55670.1	Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family. (376 aa)
	gcvT	Glycine cleavage system protein T; Catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (374 aa)
	ANJ58776.1	Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)
	gcvT-2	Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine. (360 aa)

Your Current Organism:

Pseudomonas silesiensis

NCBI taxonomy Id: 1853130
Other names: DSM 103370, P. silesiensis, PCM 2856, Pseudomonas silesiensis Kaminski et al. 2018, Pseudomonas sp. A3(2016), strain A3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANJ55653.1	ANJ55654.1	PMA3_11050	PMA3_11055	Sarcosine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.	0.997
ANJ55653.1	ANJ55667.1	PMA3_11050	PMA3_11120	Sarcosine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.	0.659
ANJ55653.1	ANJ55670.1	PMA3_11050	PMA3_11135	Sarcosine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.	0.567
ANJ55653.1	ANJ58776.1	PMA3_11050	PMA3_27925	Sarcosine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.933
ANJ55653.1	ANJ58777.1	PMA3_11050	PMA3_27930	Sarcosine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.	0.994
ANJ55653.1	gcvT	PMA3_11050	PMA3_23170	Sarcosine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycine cleavage system protein T; Catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.431
ANJ55653.1	gcvT-2	PMA3_11050	PMA3_28985	Sarcosine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine.	0.431
ANJ55654.1	ANJ55653.1	PMA3_11055	PMA3_11050	Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.	Sarcosine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
ANJ55654.1	ANJ58776.1	PMA3_11055	PMA3_27925	Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.	Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
ANJ55654.1	ANJ58777.1	PMA3_11055	PMA3_27930	Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.	Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.	0.941
ANJ55667.1	ANJ55653.1	PMA3_11120	PMA3_11050	Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.	Sarcosine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.659
ANJ55667.1	ANJ55670.1	PMA3_11120	PMA3_11135	Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.	Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.	0.967
ANJ55667.1	ANJ58776.1	PMA3_11120	PMA3_27925	Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.	Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
ANJ55667.1	gcvT	PMA3_11120	PMA3_23170	Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.	Glycine cleavage system protein T; Catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.921
ANJ55667.1	gcvT-2	PMA3_11120	PMA3_28985	Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.	Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine.	0.920
ANJ55670.1	ANJ55653.1	PMA3_11135	PMA3_11050	Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.	Sarcosine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.567
ANJ55670.1	ANJ55667.1	PMA3_11135	PMA3_11120	Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.	Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.	0.967
ANJ55670.1	ANJ58776.1	PMA3_11135	PMA3_27925	Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.	Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.431
ANJ55670.1	gcvT	PMA3_11135	PMA3_23170	Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.	Glycine cleavage system protein T; Catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
ANJ55670.1	gcvT-2	PMA3_11135	PMA3_28985	Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.	Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine.	0.925