STRINGSTRING
Tb11.01.5500 Tb11.01.5500 Tb11.01.2250 Tb11.01.2250 Tb11.01.0820 Tb11.01.0820 Tb11.01.0280 Tb11.01.0280 Tb11.03.0680 Tb11.03.0680 Tb10.61.0490 Tb10.61.0490 Tb10.61.1030 Tb10.61.1030 Tb10.61.2440 Tb10.61.2440 Tb10.389.0280 Tb10.389.0280 Tb10.6k15.0360 Tb10.6k15.0360 Tb10.70.3570 Tb10.70.3570 Tb09.244.2650 Tb09.244.2650 Tb09.211.2550 Tb09.211.2550 Tb09.160.3820 Tb09.160.3820 Tb09.160.1560 Tb09.160.1560 TB927.1.1700 TB927.1.1700 TB927.1.1370 TB927.1.1370 Tb927.7.700 Tb927.7.700 Tb927.3.3590 Tb927.3.3590 Tb927.8.2600 Tb927.8.2600 Tb927.8.1980 Tb927.8.1980 Tb927.5.2530 Tb927.5.2530 Tb927.6.2780 Tb927.6.2780 Tb927.4.3670 Tb927.4.3670 Tb927.6.4350 Tb927.6.4350 Tb927.2.2950 Tb927.2.2950
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tb11.01.5500U3 small nucleolar ribonucleoprotein protein IMP3, putative. (226 aa)
Tb11.01.2250Uncharacterized protein. (975 aa)
Tb11.01.0820Uncharacterized protein. (1216 aa)
Tb11.01.0280WD_REPEATS_REGION domain-containing protein. (805 aa)
Tb11.03.0680Uncharacterized protein. (948 aa)
Tb10.61.0490PINc domain-containing protein. (207 aa)
Tb10.61.1030U3 snoRNA-associated protein UTP11, putative. (346 aa)
Tb10.61.2440Uncharacterized protein. (1040 aa)
Tb10.389.0280Uncharacterized protein. (1236 aa)
Tb10.6k15.0360Uncharacterized protein. (410 aa)
Tb10.70.3570DRIM domain-containing protein. (3901 aa)
Tb09.244.2650Uncharacterized protein. (897 aa)
Tb09.211.2550WD_REPEATS_REGION domain-containing protein. (444 aa)
Tb09.160.3820Nucleolar RNA binding protein, putative. (501 aa)
Tb09.160.1560Uncharacterized protein. (2631 aa)
TB927.1.1700AATF-Che1 domain-containing protein. (493 aa)
TB927.1.1370rRNA biogenesis protein, putative. (679 aa)
Tb927.7.700Uncharacterized protein. (666 aa)
Tb927.3.3590U3 small nucleolar ribonucleoprotein protein MPP10, putative. (672 aa)
Tb927.8.2600WD_REPEATS_REGION domain-containing protein. (646 aa)
Tb927.8.1980WD_REPEATS_REGION domain-containing protein. (477 aa)
Tb927.5.2530RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1039 aa)
Tb927.6.2780U3 small nuclear ribonucleoprotein (SnRNP), putative. (287 aa)
Tb927.4.3670CBF domain-containing protein. (457 aa)
Tb927.6.4350KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (325 aa)
Tb927.2.2950Uncharacterized protein. (980 aa)
Your Current Organism:
Trypanosoma brucei
NCBI taxonomy Id: 185431
Other names: T. brucei brucei TREU927, Trypanosoma brucei TREU927, Trypanosoma brucei brucei TREU927, Trypanosoma brucei brucei strain 927/4 GUTat10.1, Trypanosoma brucei strain TREU927
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