STRINGSTRING
Tb11.01.0420 Tb11.01.0420 Tb11.02.4040 Tb11.02.4040 Tb11.02.1680 Tb11.02.1680 Tb10.61.2630 Tb10.61.2630 Tb10.6k15.2840 Tb10.6k15.2840 Tb927.3.3850 Tb927.3.3850 Tb927.5.4500 Tb927.5.4500 Tb927.3.1210 Tb927.3.1210 Tb927.3.5420 Tb927.3.5420 Tb927.8.3660 Tb927.8.3660
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tb11.01.0420Protein transport protein sec13, putative; Belongs to the WD repeat SEC13 family. (327 aa)
Tb11.02.4040Protein transport protein Sec31, putative. (1231 aa)
Tb11.02.1680Lectin, putative. (545 aa)
Tb10.61.2630Protein transport protein Sec13, putative; Belongs to the WD repeat SEC13 family. (374 aa)
Tb10.6k15.2840Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (744 aa)
Tb927.3.3850Sec16_C domain-containing protein. (1387 aa)
Tb927.5.4500ADP-ribosylation factor, putative; Belongs to the small GTPase superfamily. SAR1 family. (194 aa)
Tb927.3.1210Protein transport protein Sec24C, putative. (973 aa)
Tb927.3.5420Protein transport protein Sec24A, putative. (903 aa)
Tb927.8.3660Protein transport protein Sec23, putative. (969 aa)
Your Current Organism:
Trypanosoma brucei
NCBI taxonomy Id: 185431
Other names: T. brucei brucei TREU927, Trypanosoma brucei TREU927, Trypanosoma brucei brucei TREU927, Trypanosoma brucei brucei strain 927/4 GUTat10.1, Trypanosoma brucei strain TREU927
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