STRINGSTRING
Tb927.5.840 Tb927.5.840 Tb927.8.1260 Tb927.8.1260 TbEAP1 TbEAP1 Tb09.160.5160 Tb09.160.5160 Tb09.211.0180 Tb09.211.0180 Tb09.211.3670 Tb09.211.3670 Tb10.6k15.3220 Tb10.6k15.3220 Tb10.6k15.2890 Tb10.6k15.2890 Tb11.03.0050 Tb11.03.0050 Tb11.02.3160 Tb11.02.3160 Tb11.02.4620 Tb11.02.4620 Tb11.01.8320 Tb11.01.8320 Tb927.6.2050 Tb927.6.2050 Tb927.2.4550 Tb927.2.4550 Tb927.6.670 Tb927.6.670 Tb927.4.3850 Tb927.4.3850 Tb927.4.1630 Tb927.4.1630 Tb927.3.5130 Tb927.3.5130 Tb927.3.5140 Tb927.3.5140 Tb927.3.5150 Tb927.3.5150 Tb927.4.4170 Tb927.4.4170 Tb927.7.4670 Tb927.7.4670 Tb927.7.3380 Tb927.7.3380
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tb927.5.840Kri1_C domain-containing protein. (994 aa)
Tb927.8.1260CLP1_P domain-containing protein. (1034 aa)
TbEAP1RNasePH-like protein exosome-associated protein 1 Rrp42 homologue. (397 aa)
Tb09.160.5160Exosome complex exonuclease RRP40. (304 aa)
Tb09.211.0180Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (658 aa)
Tb09.211.3670CCHC-type domain-containing protein. (390 aa)
Tb10.6k15.3220ATP-dependent DEAD/H RNA helicase, putative. (950 aa)
Tb10.6k15.289040S ribosomal protein S8, putative. (260 aa)
Tb11.03.0050RNA processing factor 1, putative. (331 aa)
Tb11.02.3160Phosphotransferase, putative. (540 aa)
Tb11.02.4620Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (781 aa)
Tb11.01.8320Exosome-associated protein 2. (294 aa)
Tb927.6.2050Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (213 aa)
Tb927.2.4550Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (905 aa)
Tb927.6.670Ribosomal RNA processing protein 45. (363 aa)
Tb927.4.3850WD_REPEATS_REGION domain-containing protein. (453 aa)
Tb927.4.1630Ribosomal RNA processing protein 6. (736 aa)
Tb927.3.5130Exonuclease domain-containing protein. (452 aa)
Tb927.3.5140Exonuclease domain-containing protein. (762 aa)
Tb927.3.5150Exonuclease, putative. (291 aa)
Tb927.4.4170rRNA methyltransferase, putative. (284 aa)
Tb927.7.4670Ribosomal RNA processing protein 4. (324 aa)
Tb927.7.3380Protein MAK16 homolog; Belongs to the MAK16 family. (276 aa)
Your Current Organism:
Trypanosoma brucei
NCBI taxonomy Id: 185431
Other names: T. brucei brucei TREU927, Trypanosoma brucei TREU927, Trypanosoma brucei brucei TREU927, Trypanosoma brucei brucei strain 927/4 GUTat10.1, Trypanosoma brucei strain TREU927
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.